Micropterus salmoides (largemouth bass): 119914256
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Entry
119914256 CDS
T07309
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119914256
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
119914256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
119914256
NCBI-ProteinID:
XP_038589358
LinkDB
All DBs
Position
Unknown
AA seq
2121 aa
AA seq
DB search
MTATANWVANGASLEDCHSNIFSLAELTGIKWRCYGFRSGGEYGPVISAPAQDDPILRSF
MRCVQANLLCVWRRKIKPDAKELWIFWWGEEPNLSSVIHHELEVAEEGLWECGGLSYECR
TLLFKAIHNLLERCLMDKGFVRIGKWFFKPHELEEKSLGNSEHLSCSFSFFLHGESNVCT
SVEIAQHQPAYHITEHHIRLAQASITPVQVILSPYGLSGTLTGQAYKMSDPAARKLMEEW
SYFYPMVLQHKEGGGEKEKAEASQAYDRNCHVAVDVIVGGVRMTYPAALVLIAQGDIPVE
QPPPVPAAQGLNREPNHCSVPLTPPTSPQQPCSADSGFVTSVSSVPTPDSNMGVTSISPK
HSGKKLTCQVVHQAWRECYLNQPQYVPNQPADVTPKKEVPNGVTTWDFNDLGTRASCSCS
RLKQQKLNLTTTSTANPQTNANPTQSSAQSLYPPSLPKHKTSDKTEKADKQSKRPATIPF
HHRLSVTQEAPLEQDSPGGPQLGGLVALEPPLEPLAALPSCKYPKPLSNGRKASESLLHL
PMSPLPPTLSPHPRVQDPEVLDGPVDMPVCPDGASGLGMITSETAVYAALLRQRENEAGW
WRGFRTPRTDKTDFRPPDLPAGKLEEVKTDTATEGAPLKRLYTQTLKRFKISEERVKEHI
HAFGLFQQPGVEALREPGDDPYDFKEGDIEYNFSTSKRLKGQGREPSKKVKQGEEITSNG
ALPDGKDAMSIFNSAPKSDESSQDDAAAKANPSLTREKDLVVNISDLDNIFDEDEEELGT
VYPNQHSSKLPVTTEDRPLGKEGRVAVPYPSTVADLQRMFPTPPSLEQHPAFSPIMTYRD
TPSQEPPAPSGAADHLPPLTSTQFNEYRMEIEEGMASPRLEDIKPQIGSSMFAPLSCLPS
QSLQPLKIPEQCYYRPSWALLPKMEHFPAVMHPQNNTFIRDGYTNIPSVNTLTDQEYGQM
SATTASVSTTVGILPSPATPRFSVPTPRTPRTPRGINAAGSGQGSVKQDGTELSSPVSTP
STSLPLSSVEPLARPGPSLPEAHSLYAILLLSDSVLNVFKDRNFDSCCICACNMNVKGAD
VGVYIPDSTCEDQYRCMCGFSAIVNRLLAHGTGLFLEDELDIYGRTSEVGRAAERRLALC
RRDPTMGDHRAKRPQDSAPASPSVMVLLQEQCSQPISSLASLHLPLSCSCHGRKGALLQS
WMSEKQWADGSDACVECYNALEQGLQYVDNPTGGKVDPAVVRSTALHPWPHTNVVDMSML
SSQDMVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPE
PLPIPTVLLGYDRDRDFLALSPLALPFWEKLLLEPYGGQRDVAYLVLCPNSPSLLAAARA
FFQELSAVYETCCLGKHRPLAKVSRDGLVRVGEEVEPEKLEELDVDQWLTGPWAGQQHTD
NLSKLKLYAYACKQQLGPQLSALPLDSSLLLPPKVQPPLNPTSSAQAASSGQLQAWAPDG
EQAPGATSSGNAPTPSGANSNQTAETTQGSTSDSKGPSSATQPANTPAENPELTPEQARI
GIPTVADSMESHANPPAIVIYIVDAFLSSSGARSEGGEEEEVDEVEAGSIWLLGLLRCYT
EMLQTLPETMRPALVLQVVPCQYLLQPASGENHLYLQHLRSLAFSCYSQCRRLLPQQTHI
KSLTGFGPVSTISSVLKSPEHPSPLQLYCPPFILGPTRPKQPEPGEIWAELPPKYNVLFV
GYCLSHDQRWILVSCTDQQGELLETCIINIDVPNRVRHPKVSARKMGLQKLWEWCIGIIQ
MTSLPWRIVIGRLGRLGHGELKDWSSLLGEHSLHSIGRQLKEACRICGISAADSPTILSA
CLVAMEPQGSFVVMPDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQLA
PSSYPTEDNNDDMFDLPFPELENDIGHDMMLITGNLHPSPNTSPVPSPGSPSGMGMGMGS
HFQHNKNQGERLLSRDSPPEELKQQPLALGYYVSTAQANGLPHWFWASCPQAESQCPLFL
KASLHHHISIAQSDELVSDKTKRTPHPLDSKTTSDVLRFVLEQYNALSWLTCTPATQDRQ
SCLPVHLAVLIQMYNAILNML
NT seq
6366 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaacagcgaattgggtggctaacggggcaagccttgaggattgccactccaac
atcttctctctggctgagttgacgggcattaaatggcgttgctacggcttccgtagtggt
ggggagtatgggccggtgatctcggcccccgcccaggacgacccgatcctgcgtagcttc
atgcgctgcgtgcaggccaacctgctgtgtgtatggcgacgcaaaatcaagcccgacgcc
aaggagctgtggatcttctggtggggtgaagagcccaacctctccagtgtcattcatcat
gagctggaagtggctgaggaggggctttgggagtgcggcgggctgtcctacgaatgcagg
accctcctgttcaaggccatacacaacctgctggagagatgtttgatggataaaggattt
gtgaggatcgggaagtggtttttcaaaccacatgaactggaagaaaagtctttgggcaac
agtgaacacctatcatgctccttctccttcttcctccacggggagagcaacgtgtgcacg
agtgtggagatcgcccagcaccagcctgcataccacatcacagaacaccacattcgcctc
gcacaggcctccatcacaccagtacaagtgatcctgagtccatacggcctgagcggcact
ctgactggtcaggcctacaagatgagtgacccagcggcccggaagctgatggaggagtgg
agctacttctaccccatggtacttcagcacaaagagggaggtggagaaaaggaaaaagca
gaagcaagccaggcctatgatcgcaactgtcacgtggcagtggatgtcatcgtaggtgga
gtaaggatgacctacccagctgctttagtgctgattgcccaaggggacataccagtggag
cagcctccacctgttcctgcagctcaaggtctcaacagggagccaaaccactgcagcgtg
ccgctcacgccgccaacatcgccgcagcagccctgctcagcagacagtggctttgtgacc
tccgtctccagtgtccccacaccagacagcaacatgggggtcaccagcatcagcccaaag
cattctgggaagaagctaacctgtcaagtagtccatcaagcctggagggagtgctatctc
aaccagcctcagtacgtaccgaatcagccagctgacgtgacgcctaagaaggaagtgcca
aatggagtaaccacatgggacttcaatgatctgggaacgagagcgtcctgcagctgctcc
aggttgaagcagcagaagctgaatctgaccaccacatccactgccaacccccagactaat
gccaatcccactcagtcctctgcccagtcattgtaccccccctctctgcccaaacacaag
accagtgacaagacagaaaaggctgacaaacagtccaagaggccagccacgatccccttc
caccaccgtctgtctgtcacacaggaggcccctctggaacaggactcaccaggagggccc
cagcttgggggtcttgtggcactagagccaccgttggagcctctggcagctctgccaagc
tgcaagtatcccaaacccctttccaatggcagaaaagcctcggagtcacttctgcatttg
ccaatgtctccacttccgcctacactcagcccacaccctcgagtgcaggacccggaggtc
ctggatgggcctgtggatatgcccgtctgtccggatggggcttcagggctggggatgatt
accagcgagacagctgtgtatgcagccttgctgaggcagagggagaatgaggcaggttgg
tggagaggcttcaggactcccaggactgataagactgacttcagaccccctgatctccct
gctggtaaattagaggaagtgaagacagatacagccactgagggcgctccgctaaagaga
ctgtacacacagactctgaagagatttaaaatctcagaggagagggtgaaggagcacatc
catgcttttggcctgttccagcagccaggtgtggaggcactgcgggagcccggggatgat
ccctatgacttcaaggaaggggacatagagtacaatttctccacttccaagaggttaaag
ggtcaagggcgagaacccagcaaaaaggtcaagcagggagaagaaatcactagcaacgga
gcactgcctgatggaaaagatgcgatgtccatttttaactctgcaccaaaatcagatgaa
tcaagtcaggatgacgcagctgccaaagccaatccttctctgaccagagaaaaagatcta
gtggttaacatctctgatctagacaacatatttgatgaagacgaggaagagttggggact
gtttaccccaaccagcactcaagcaagcttccagtaacaacagaagatcgccctctgggg
aaagaagggagagttgcagtaccttatccatcaacagtagcagacctccagcggatgttt
cccaccccaccttctttggagcagcacccagccttttctcccatcatgacatatcgtgac
actccgagtcaagagccccctgcgcccagcggagcggctgatcacttgccgcctttaact
tctacccagttcaacgaatacaggatggagattgaggagggcatggccagtcccaggctg
gaggatatcaagccacaaataggatcttccatgtttgcaccgctatcctgcctacccagc
cagagtctacaaccactcaagattcccgagcaatgttactatcgtccatcctgggccctc
ttacccaaaatggagcatttcccagcggtcatgcatccccagaataacactttcatcaga
gatggatacacaaacatccccagcgtcaacaccctcacagaccaggagtacggccagatg
agcgccaccactgcctctgtgagcaccactgttggcatcctcccgtctcctgccactccc
cgcttctctgtgcccactccacgaacccctcgtacaccacggggtattaacgctgcaggc
tctgggcagggttcagtgaagcaggatggtactgagctcagctcacctgtctccacgccc
tccaccagcctgcctcttagctctgtagagcccctagctcggccaggaccctccctgcct
gaggcccacagcctgtatgctatcctcctgctctcagattccgtcctcaacgtcttcaaa
gatcgcaactttgacagctgctgtatctgtgcctgcaatatgaatgtcaaaggagcagat
gtgggggtgtatatccctgattccacttgtgaagatcagtaccgctgtatgtgtggcttc
agtgccatagtgaacaggctgctggcccatggcacaggcctcttcctggaggatgagctg
gatatttatggtcggacatctgaagtaggccgggcggccgagaggaggctggctctttgc
cggcgggacccaactatgggagaccacagggccaagcggccgcaggactccgcccctgcc
tctccgtcagtcatggtccttctgcaggaacagtgctcccagcccatttcttccctggca
tcactgcatctccccctcagctgttcctgccatggccgcaagggggcactgctccaaagc
tggatgtctgaaaagcagtgggctgatgggagtgatgcctgtgtggagtgttacaatgcc
ttggaacaggggctgcagtatgtggataaccccacaggagggaaagtagatccagctgtt
gtcagaagtactgctcttcacccctggcctcacacgaatgtggtggacatgagcatgttg
tcatcccaggatatggttcgtatgctgctgtctctgcagcctttcctgcaggatgccatc
cagaagaagagaacaggacggacttgggaaaatatccagcacgttcagggtccactcacc
tggcagcagttccataagatggctgggagaggctcctacggttcggaagagtcgccagag
cccttgcccatccctacagtattactgggctatgaccgggacagggacttcttggcattg
tctcctttggcgttacctttctgggagaagttgctgctggagccttatggggggcagcgg
gatgtggcctatttggtgctttgtcccaacagcccctctctgctggctgcagccagggct
ttcttccaggagctcagtgctgtttacgagacgtgctgccttgggaagcaccgtcctctg
gccaaggtgtccagggatggcctcgtgcgtgtaggggaagaggtggagccagagaagctg
gaggagctggatgtggaccagtggttgactggaccctgggctggacagcagcacaccgac
aacctcagcaaacttaaactctacgcgtatgcatgcaagcagcagcttggtccccagctc
tcagccctgcctttggacagcagtcttctgttgcctcctaaagtccagcctcctttaaac
cccacatcctcagcccaggctgcctcttctgggcagcttcaagcttgggctcctgatggt
gaacaagcgccaggggctacgagttcaggaaatgctccgactccgagtggagcaaactcc
aaccagacggctgagacaactcaaggctcgaccagcgattctaaagggccctctagtgcc
acacaaccagccaacacaccagcggaaaaccctgaactcactcctgagcaggctagaatc
ggcatccccactgtggccgactcaatggagagccatgccaacccaccagctattgttatt
tacatagtggatgcttttcttagctcaagtggagcaagaagtgaagggggggaggaagaa
gaggttgacgaggtagaggcaggtagcatttggctactagggcttctacgctgctacaca
gagatgctacagactttgcctgagacgatgagacctgcgctggtgctacaggtggtgcca
tgccagtaccttctccagccagccagtggggagaaccatttgtacttgcaacatctgcgc
tccctggccttctcctgttactcccaatgcaggcgcctgctgcctcagcaaacgcacatc
aagtccctgactggctttggaccagtgtccactatcagttctgtacttaagagtccagag
catcccagccctctgcagctatactgtccccccttcatccttggtccaacccgtcccaag
cagccagaaccaggggagatatgggcagagctccctcccaaatacaatgtgctctttgtt
ggatactgcctatcgcatgaccagcgctggatcctggtgtcctgcaccgaccagcagggg
gagctgctggagacctgcattatcaacattgatgtacccaacagagtgcgacatcctaag
gtttcagccaggaagatgggactacagaaactgtgggaatggtgtattgggatcatccag
atgacctcacttccatggaggattgtgattggtcgattaggcagactggggcatggggag
ctaaaagactggagctcactccttggggaacattccctccattcaatagggcgccagctg
aaggaggcttgtcgtatttgtgggatctcagctgctgactcccccactatcctcagcgcg
tgcctggtagccatggagccacagggctcctttgtggtcatgcctgatgcagtgaccatg
ggctcagtgtttggccgcagcactgcactgaacttgcagacctcgcagctcaacacacct
caagacgcttcctgtacacacatactcgtcttcccaacttctgccaccacccagctggca
cccagctcctaccccactgaggacaataatgatgacatgtttgatctgccctttcctgaa
ctggagaacgacattggccatgacatgatgctgatcacggggaacctccacccttcccct
aacacatctcctgtgccctcgcctggctctccgtctggaatgggaatgggaatgggatca
catttccagcacaacaagaaccagggagagcgcttactgtccagggacagtccaccagaa
gagctgaagcagcagccgctggctctgggctactacgtctccactgcacaggcaaacggc
cttcctcactggttctgggcgtcctgtccgcaggctgagagccagtgtccactcttcctc
aaggcctccctccaccaccacatctccatagcccagtcagatgagctggtgtcagacaag
actaagaggacccctcaccccttagactcaaagaccacctctgatgtgctcaggtttgta
ttggagcagtacaatgccctatcctggctgacgtgtacccctgccacccaagaccgccag
tcctgcctgcctgtccacttggctgtactgatccaaatgtacaatgccatcctgaacatg
ctttag
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