Micropterus salmoides (largemouth bass): 119914320
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Entry
119914320 CDS
T07309
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119914320 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119914320 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
119914320 (pdlim5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119914320
NCBI-ProteinID:
XP_038589478
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MSNSYSVTLAGPAPWGFRLQGGKDFCLPLTISRLTDGGKAVKANMNVGDIILSIDGISTD
RMNHLEAQNKIKACTGNLSLTLQRPSSAPKDVVPKDQPQEIIKPVPITHPAPSTTYTKPL
SQPSPAYNKTARPFGGESSVVTASSSPAAPKVASIPSESSAFTPAAPSQPPAPSQPPQPP
FPLKSSPAAPHSAPANSLPRPSPGRSAFTSPSASSSSSNSSSPARVTAPSSSQAKVTAPS
SSQAKVIAPSSSQAKVTAPSSNPNVPQPSVYNTPINLYSNTNACEVAMGQRRGLLESQGL
SEHFNGKPIEEPENHASPLSDASKKRLIEDTEDWHPRTGTSQSRSFRILAQLTGTEKEQV
PENNGKNEAVDKTAPTVHTSAPPAKTYSKSAAAPRNGNVVPASAFKSPAAQNKPAYQPGG
PSGVPKGGAAPSFGKVAKPAPKGPDRPTPQPHPQDLNSLVQRAEHIPAGTRTPMCNKCNN
VIRGPFLVAMGMSWHPEEFNCAHCHSSLAENGFVEERGQVYCERCYEQFFAPTCARCHHK
ILGEVMNALKQTWHVSCFVCAACHQPMRGNMFHMEDGLPYCEQDYYNLFGTNCHGCDFPI
EAGDKFLEALGFTWHDTCFVCAVCSTSLEGQPFFSKKDKALCKKHAHTVNI
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagctacagcgtcactctggctggccctgccccctggggctttagactgcaa
ggagggaaggacttctgtctgcccctcaccatctcacggctcactgatggaggcaaggca
gtcaaagcaaacatgaatgttggagacatcattctgtccattgatggcatttccacagac
cggatgaatcacctagaggcccagaacaagattaaggcctgcacaggcaatctcagcctc
actctacagagaccctccagtgcccctaaagatgtagtgcctaaggaccaacctcaagaa
atcattaagcctgtcccaatcactcaccctgccccaagcaccacatacaccaagccactg
agtcagcccagtcctgcatacaacaagacagcccgaccttttggtggggaaagcagtgtg
gtcacagcttcttcctcaccggctgcccctaaagtagcctccattccctccgaatcatcc
gctttcacgccagctgccccttctcaaccacctgccccttctcaaccaccacagcctcca
tttccactgaagtcgagccccgctgccccacactcagctccagcaaactcacttcccagg
cccagtcctggtcgctccgccttcacctccccatccgcctcttcctcctcatccaactcc
tcctctccagcaagagtgacagccccctcctcctctcaagccaaagtgacagccccctcc
tcctctcaagccaaagtgatagccccctcctcctctcaagccaaagtgacagccccctcc
tccaatcctaatgtcccacagccctctgtctataacacacctatcaacctctactccaat
accaatgcttgtgaggtggccatgggacagagacgaggtctgttggagagccaggggctg
tcagagcacttcaatgggaaacctattgaggagcctgagaatcatgcttccccactgagc
gatgccagcaagaagcgtctgattgaggacactgaggactggcacccccgaaccggcacc
tcccagtcccgctccttccgtatcctggcccagctcaccggcactgaaaaggagcaagtt
ccagagaacaatggaaagaatgaggcagttgacaaaaccgctcccactgtgcacacatct
gcacctccagcaaaaacatattccaaatctgcagcagcacccaggaatggcaacgttgtc
cctgcttcagcgttcaaaagcccagcagcccagaacaagcctgcctaccagcccggaggt
ccatcaggtgttcctaagggtggagctgctccttcatttggcaaggttgccaagcctgct
cctaaaggtccagaccgccccacaccacagccacatccacaggacctcaactctctggtg
cagcgggctgagcacatcccagctggcacgcgcaccccaatgtgcaacaagtgcaacaat
gtcatcaggggcccattccttgtggccatgggcatgtcatggcaccccgaggaatttaac
tgtgctcactgccactcctccctggcagaaaatggatttgtggaggagaggggccaggtg
tactgtgaacgttgctacgagcagttcttcgctcccacctgcgcccgctgccaccataag
attctgggggaagtcatgaatgccctgaaacagacctggcacgtgtcctgttttgtctgt
gccgcctgccaccagccaatgagaggcaacatgtttcacatggaggatgggctgccatac
tgtgaacaagactactacaatctgtttgggaccaactgccacggctgtgacttccccatc
gaggcaggggacaagttcctggaggctctaggattcacctggcatgacacctgctttgtg
tgtgcggtctgctctactagtctggaaggtcagccattcttctccaaaaaagacaaggct
ttgtgcaagaaacatgcccacactgttaacatctga
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