Micropterus salmoides (largemouth bass): 119914376
Help
Entry
119914376 CDS
T07309
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119914376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119914376
Membrane trafficking [BR:
msam04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
119914376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WDR72_alpha-sol
WDR90_beta-prop_4th
Beta-prop_RSE1_2nd
Beta-prop_TEP1_C
VPS8_N
Motif
Other DBs
NCBI-GeneID:
119914376
NCBI-ProteinID:
XP_038589587
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MSGNSLVLPIVLWGRTAPTHCISSLLVMDDFSTIITGCHDGQICLWDMTPELEICPRAML
FGHTASITCLSKASACSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACAHTDILFYQFT
IGTQREGRLLCNGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIITAEVSRMQDLDPVFEEESKPIYCHGCQSISFCTFTQSSLLVVCSKYWRV
FDAGDYSLLCSVASEGDQAWTGGEFIAADKVIIWTEDGCSYIYKLPASCLPASEHFRSDV
GRTKEGSIPPLVYSIVNHSDKQLLICPPVTLFFFGRREPFHKLLIQGDSAGRLSLWSIPD
TSPQQLLSTPAELQVTSTISLQEAFDKLTPVSAGIIDQLSVLPGKEEPIKVTASVYIPSQ
GRLVCGREDGSIILVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCVLYPYQISP
RYDQRSLVSGGVDFSVIVWDIFTGEMKHIFCVHGGEITQLIVPPENCSTRVQHCVCSVAS
DHSVGLLSLRERKCIMLASRHLFPIQVIKWRPADDYLVVGCSDGSVYVWQMDTGALDRCV
MGITAVEILNACDELAPATVDALSHSAVNLKQAMTRRSLAALKNMAQHKLQTLATNLLAA
DNADKGNLPKYSHNALVVQAMKTNLTDSDMHVLFFDVEAVIIQLLTEEAQRPNPMLVSPE
TLQKSQAGADKGGSFLANKIFKQVKETMKETIKEHLLDEDEEEEEEMRKREEKSKSLSLL
EYNLTMDTAKLFMSCLHAWGLNEQLDSICLERLGMLRPHCPISFGLISRGGHMSLMLPTF
KESLLRQLSLATGLKLSLTDIVGKGTYGVSRAVTTQHLLSVISLANTLMGMTNATFVGEH
MKKAPARPPRPGGTPETPRRTPAAPPQPSNPALQAQIKQGWSQLAAMHCVMLPDLLGLDK
YRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIGQSGRKDTIDMWAPYLPQYVDAVSS
PGTTTEPSPPAPPPPEAQPIETKAPEEEMDVTDDDITAGCLSNLPPNAKKISNSYEERRK
QATAIVLLGVIGAEFGAEIEPPKGSARARTGGQAPEGFGLTSGGSSNYSLARHTCKALTF
LLLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANVTM
GLPLNPPADSARSARHALSLIATARPPAFITTIAREVHRYNAAQANSQSQQNVHTTTLAR
AKTEILRVIEILIEKMPGDVVDLLVEVMDIIMYCIEGSLVKKKGLQECFPAICKFYMVGY
CDRSHRIAVGARQGSVALYDVRTGKCQNIHGHKGPITAVSFAPDGRYLATYSNADSHISF
WQMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSQNHLKLARLIWTSNRNVILMAH
DGKEHRFMV
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaacagcttggttctacccatagtgctgtggggccgcacagctcccacccac
tgcatcagcagtctgctggtgatggacgacttcagcaccatcatcactggctgccatgac
ggacagatttgcctctgggacatgacgcctgagttggagatctgtcccagggccatgctg
tttggtcatacagcctccatcacctgtctgtctaaagccagcgcgtgcagtgacaaacag
tacattgtcagtgcatcagagagcggagagatgtgtttatgggatgtgaatgatggacgc
tgtatagagttcaccaagttggcgtgtgctcacactgacatactattctatcagttcacc
atcggcactcagagggagggacgtctgctttgtaatggccattacccagaaatccttgtg
gtggatgccaccagcctggaggtcctgtactcactggtgtccaagatctctcctgactgg
atcagctccatgagcatcatccgatcccaccgaacacaagaggacaccgtggtggcagtg
tccgtgacagggattttgaaggtctggattatcacagctgaggtcagcaggatgcaggac
ctggatcctgtgtttgaagaagaatccaaacccatctactgtcacggctgtcagagtatt
tccttctgtaccttcacccagagcagcctgctggttgtctgctccaagtactggagggtg
tttgatgcaggtgattactcgttactctgctcagtagcgagtgagggcgaccaggcctgg
actggaggtgagttcatagccgcagacaaagtcatcatctggaccgaagatggctgcagt
tatatctacaagctgcctgccagctgtctgcctgctagtgaacatttccgcagtgatgtt
gggagaaccaaagaaggctcgatccctccactggtatacagcattgtcaaccactcagac
aaacagctgctgatctgccctcctgtgactctgttcttcttcggccgacgggagcccttc
cataagctgctgatccagggagactcagcgggcagactgtccctgtggagcatcccagac
acgtcgcctcagcagctgctttcgacccctgcagagctgcaggtgacgtccaccatcagt
ctccaggaggcgttcgataagttgacccccgtttctgcagggatcattgaccagctcagt
gtcctgcctggaaaagaagaacccatcaaggtgacggccagcgtgtacatcccctctcag
ggtcgcctggtgtgcgggagagaagacggcagcatcatcctggttccagccacacagacc
gccatcgtccagctgctgcagggggagcacatgctcaggagaggctggcccccccatcgc
accctgcgaggtcaccggaacaaggtgacttgcgtcctgtatccgtaccagatctccccc
cgctacgaccagcgctcgctggtgtccggaggagtggacttctccgtcattgtctgggac
attttcactggagagatgaagcacattttctgtgtccatggaggagagatcacccagctc
atcgtcccgcctgaaaactgcagcacacgggtgcagcactgcgtttgctcggtggccagc
gaccactctgtcggcctgctcagtctcagggagaggaagtgcatcatgctggcgtcgcgc
cacctcttcccaatccaggttatcaagtggcgtccggcagatgactacctggtagtaggc
tgctctgacggctctgtctacgtctggcagatggatacaggagccttggaccgctgtgtg
atgggtataacggcagtggagatcctgaacgcctgtgatgagctggccccggccactgtg
gatgctctgagccactctgctgtgaacctgaagcaggcaatgactcgccgcagcctggcg
gccctgaagaacatggcccagcacaaactgcagacgctcgccaccaacctgctggctgca
gacaacgctgacaagggaaacctgccaaaatactcccacaatgccctggtggtccaggca
atgaagaccaacctgacggactcggacatgcatgtgctgttcttcgatgtggaggctgtc
atcatccagctgctgacagaggaagcccagagaccgaaccccatgctggtgtctccagag
acgctgcagaagagccaggccggggccgacaagggggggtccttcctggccaacaagatc
ttcaaacaggtgaaggagacgatgaaggagaccatcaaggagcatcttttggacgaagac
gaggaggaggaggaggagatgaggaagcgggaggagaagtccaagtctctgagtctgctg
gagtacaacctgacaatggacacggccaaactcttcatgtcctgtctgcacgcctggggc
ctcaacgaacagctggacagcatctgtctggaacgactgggcatgctcagaccccactgc
cccatctcctttggcctgatctccagaggaggtcacatgtccctcatgctgcccaccttc
aaggagtctttgctgcggcagttgtccctggcgacgggtctgaagctgagtctaacggac
attgtgggaaaggggacgtatggcgtgtcaagggctgtcaccacacagcacctcctgtct
gtaatttctttggccaacactctgatgggcatgaccaacgccactttcgtcggcgagcac
atgaagaaagcacctgccaggcctcccagaccaggaggaaccccggagactcctcgcagg
acgccggctgccccccctcagccctccaacccggcgctacaggcccagatcaaacaaggt
tggagccagctggcagccatgcactgtgtgatgcttcctgatctccttggcctggacaag
tacagacctcctctgctggagatgctggcgaggagatggcaggaccgctgtctggaggtg
cgagaggcagcacaagctctcctattggctgagttaagaaggattggccaatcaggacga
aaggacaccatcgacatgtgggctccctacctgcctcagtatgtggatgctgtcagctcc
cctggaacaaccactgagccctcccctccggccccgcctccccctgaggctcagccaata
gaaaccaaggctcctgaggaggaaatggacgtcacggatgatgacatcactgcaggctgt
ctgtccaatcttccaccaaacgccaagaagatctcaaactcatacgaggagcggcgtaag
caggccaccgccatcgtgctgctcggggtcatcggggctgagtttggtgctgagattgaa
cctccaaagggttcagcacgggcccgaactggcggacaggcgcccgagggcttcggactg
acaagcggagggtcatccaactactcactggccagacacacctgtaaggcgctgaccttc
ctgctgctgcagcccccaagccccaagctaccccctcacagcaccatccgccgcacggcc
atcgacctgattggccgaggcttcaccgtatgggagccgtatatggacgtgtcagcggtg
ctcatgggactgctggagctctgcgctgacgctgagaagcagctggccaatgttaccatg
ggtctgcccctcaacccgcctgctgattcggctcgttcagctcgtcacgccctctctctt
atcgctactgcccggccaccggccttcatcaccaccatagcacgagaggttcatcggtac
aatgcagctcaggcgaactctcagtcgcagcagaacgttcacaccaccactctggccaga
gccaagactgagatactgcgagtgattgagatcctgatagagaagatgcctggagacgtc
gtggatctgctggttgaggtgatggatatcatcatgtactgtattgaaggttctctggtg
aagaaaaaaggactgcaggagtgtttccctgctatttgcaagttctacatggtgggttac
tgcgaccgtagtcaccgcatcgccgtcggagctcgccagggttcggtggccctctacgat
gttcgtactggaaaatgccagaacatccacggtcataagggtcccatcacagcagtgtca
ttcgcccccgatggtcgttacctggcaacatactccaatgctgacagccacatctccttc
tggcagatgaacaccagtctgctgggcagcattgggatgctgaactcggcccctcagctc
cgctgcattaagacctaccaggttcctccggtgcagccagcgtccccgggctcccagaat
cacctgaagctcgcccgcctcatctggacctccaaccgcaacgtcatccttatggctcat
gacggcaaggagcaccgcttcatggtctaa
DBGET
integrated database retrieval system
