KEGG   Micropterus salmoides (largemouth bass): 119914455
Entry
119914455         CDS       T07309                                 
Symbol
dcc
Name
(RefSeq) netrin receptor DCC isoform X1
  KO
K06765  deleted in colorectal carcinoma
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04517  IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:msam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    119914455 (dcc)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:msam04515]
    119914455 (dcc)
Cell adhesion molecules [BR:msam04515]
 Immunoglobulin superfamily
  DCC/UNC5 family
   119914455 (dcc)
SSDB
Motif
Pfam: Neogenin_C fn3 I-set Ig_3 Ig_2 ig Pur_ac_phosph_N FN3_DSCAM-DSCAML_C Ig_Rha78A_N V-set Fn3_VIN3 fn3_SORL1 Interfer-bind C2-set_2 C2-set_3 Ig_5 Ig_4 Protocadherin EphA2_TM Ig_PDGFR_d4 Fn3_SaeA_3rd FAM176
Other DBs
NCBI-GeneID: 119914455
NCBI-ProteinID: XP_038589690
LinkDB
Position
Unknown
AA seq 1503 aa
MELVLVGCIGDVWEVLVLRRRRTGGLYLLLLCWLLAAHTTAHASDASSSSSSYSLGGFVD
FTFTQEPQDTVTVRGGVLQLDCQAESDAVAGPPTITWRKDGVLLSAVVDERRRQLANGSL
LVQNVVHSRHHRPDEGEYQCLATLDGLGSIVSQSARVTVAGPLKVVVPTESVSSYLGDTA
LLRCEVSGDPTPVIRWQKNREDLPLTFDLDSRLAVLPSGSLQVSRVQPPDSATYRCLADN
PSSTRTGTDAELRVLPEPGVSRNLQFLQRPSRVTALLGTDAVLECSASGYPTPSIQWRRG
EELIQSWNKKYSLLAGSNLIIRSVTDDDSGSYSCTATNKNHNITAHAGLSVLVPPQFLNY
PTNTYAYESTDIELECAVTGSPLPTVRWMKNGEEVIPSDYFQIVDGSNLQILGLVKSDEG
FYQCVAENSAGSSQAMAQLLLREPVSPSPGVALPSAPRDLVPVLVSSRFVRLSWRPPEET
RGAVQTYGIYYSQDGVERERSVNVSEPESLELTVSNLKPEESYSFRVIAYNDVGPGESSA
PLRITTKPDIQVPSRVESLQAEALSPTSVQVSWEPPSQPNGPVLGYRLLWTESPSGKEQS
VEVNGLNYKMDGLNKFTEYTVRVLAINRYGPGAASETVSVTTQSDVPSAPPQNITLEVVL
SRSIKVSWQPPQRSAQNGVITAYKIKYRKTGRRGDQEAIEPNNFWYLFTGLEKGSQYSFQ
VAAMTANGTGPASDWYTTETPENDLDESQVPDQPSSLHVRPLPNSIIMSWTPPLSPNILV
RGYIIGYGVGSPYAETVRVDSKQRYYSIENLEPSSHYVISLKAFNNAGEGVPLYESAVTR
SLTDPIDPSEDDLFHLFDKYPTPMPDTSTPMIPPVGVQAVALSSDSVRVSWADNSMTKNQ
KASEVRYYSIKWKTSYSTSGKYKSADTTALSHTVTSLKPNTMYEFAVMVTKGRKSSTWSM
TAHATTYEAAPSSAPKDLTVISREGRPRAILISWQPPMEANGRITGYILYYTLDKNMPID
DWVMEAISGDRLTHQVVDLNLDTVYYFRIQAKNAKGVGPLSEPIHFRTAKVEHPDKMAND
QGRGGDHAYWPSDTNLIDRSSINESPIGQMRPPHGSATPQKNSNLLVIIVVSVGAVTVVV
VVIVALICTRRSSAQQRKKRASHSASKRKGSQKDLRPPDLWIHHEEMEMKNMEKAPSVAP
SGHDSPIQSCQDLPQIAHSQSESQMGSKSSHSGADGDDVSSSISTLERSLAARRGTRGKM
MIPMDSQPSNTPVVSAIPVPALDSSQYPGILPSPSCGFTHNKFSLRPMPFPSLTVDRGYT
PAMPSDSSTNPLLQQQPAAQQPPPLLPGSSAPPGEHVPGVGPVPGAPVPVAAAAAEEAQA
ASGRTIPTACVRPTHPLRSFTNPLLPPPMGTIDPKVYTSMMPQSSASLPKPQVKTASLGQ
AGKARSPLLPVSVPTAPDLPEEGGTKPAEDSAANVYEQDDLSEQMASLEGLMKQLNAITG
SAF
NT seq 4512 nt   +upstreamnt  +downstreamnt
atggagctggttctggttggatgtattggtgacgtttgggaggtgctggtgctgaggagg
aggaggacaggagggctctacctgctgctgctctgctggctgctggctgcgcacaccaca
gcgcacgcctcagatgcctcctcatcttcctcctcatatagtctcggaggcttcgtggac
ttcactttcacccaggagcctcaggacacggtgacggtgcgagggggcgtgctgcagctc
gactgccaggcagagtctgatgcggtggcggggcctcccaccatcacttggcgtaaggac
ggcgtgctgctcagtgcagtggtggacgagcggcggcggcagctggctaacggctctctg
ctggtgcagaatgttgtgcactcacggcatcaccggcctgacgagggcgaataccagtgc
ctcgccacgctggacggactgggcagcatcgttagccagagcgccagggtcactgtggct
ggtcctctgaaggtggttgtccccaccgagtctgtctcctcgtacctcggcgacaccgcc
ctgctgcgttgtgaggtctcgggtgacccgacgcccgtcattcgctggcagaagaaccga
gaagacctaccactgacctttgacctcgactcccgtttagcggtgctgccttccggctct
ctgcaggtcagccgcgtccagccgccagactcggccacgtaccgctgtctggccgacaac
cccagcagcaccaggactgggacggatgccgagctacgagtgctcccagagcctggggtg
agcaggaacctccagttcctccagcgtccatccagagtaacggctctgctgggaaccgat
gccgtgctggaatgttctgcctccggatacccaactccgagcatccaatggaggagagga
gaggaactgatccagagctggaataagaagtactctctgttggcgggcagtaatctgatc
atcaggagtgtcactgatgacgactctggcagttacagctgtacagccaccaacaagaac
cacaacatcactgcacacgcagggctgagtgtactggtgcctcctcagttcctgaactac
ccgaccaacacatatgcctacgagtccaccgacatcgagctggagtgtgctgtgacagga
agcccactgccgactgtccgctggatgaaaaacggagaggaagtcatccccagtgattac
ttccagatagtggacggcagtaacctgcagattttgggattggtgaaatcagatgaagga
ttttatcagtgtgtagctgaaaattcagccggcagctcgcaggcgatggctcagctgctg
cttcgagaaccagtgtcccccagcccaggcgttgccctcccctctgccccccgcgacctg
gtccctgtcctagtgtccagccgatttgtccgactcagctggcgtcccccagaggagacc
agaggagctgtgcagacctatggcatttattactcccaggatggagtcgagagggagcga
tcagtgaacgtgtcggagccagagtctttggagctgacagtctccaacctgaaaccagag
gagagctacagcttcagggtcattgcttacaatgacgtggggccaggagagagctccgcc
cccctgaggatcaccaccaaacctgacatccaggttcccagcagagtggagtctctccag
gctgaggctctgtctcccacctcagtccaggtgagctgggagcctcccagccaaccaaac
ggcccggtgctgggctacagactgctgtggaccgagagcccgtctggcaaggaacagagt
gtggaggtgaacggactcaactacaagatggacggcctcaataaattcacagagtacaca
gttcgagttttggcgattaaccgctacggaccaggcgccgcctcagagacagtcagcgtc
accacccaatcagacgtacccagcgctcctcctcagaacatcaccttagaggttgtcctg
tccaggagcatcaaggtgtcatggcagccgcctcagcgcagcgcccagaacggcgtcatc
actgcctacaagatcaaatacaggaaaaccggtcgccgtggagaccaagaggccatcgaa
cccaacaatttctggtacctgttcacaggtctagagaagggcagccagtacagtttccag
gtagcagccatgacagccaatggaacaggtccggccagtgactggtacaccactgagacg
ccggagaacgacctggatgagagtcaggttcccgaccaacccagctccctgcacgtcagg
ccgcttcccaacagcatcatcatgtcctggactcctcccctcagcccaaacatcttagtt
cgaggttatatcattggctacggagtgggaagtccctacgccgagacggtccgagtggac
agcaagcagagatactactccatcgaaaacctagagccgagctcgcattatgtgatttcc
ctgaaggcattcaataatgccggagagggagttcctctgtatgagagcgccgtcactcga
tcgctgacagaccccattgacccatctgaggatgacctcttccatctctttgataaatac
cccactcccatgccagacaccagcactcccatgatccctccagtgggggtccaagccgtg
gctctgtcttcagactcggtccgagtctcctgggctgacaactccatgaccaagaaccag
aaggcgtctgaggtccggtactactccatcaagtggaagaccagctactccactagtgga
aagtacaagtctgcagacaccacagcgctcagccacactgtcaccagcctcaaaccaaac
actatgtacgagtttgctgtcatggtaaccaaaggccgcaagtccagcacctggagtatg
acagcacacgccacaacgtacgaagcagctcccagctccgcccctaaagatttgacagtg
atcagtcgcgagggacgaccccgcgccattttaataagctggcaaccaccgatggaggct
aacgggcgaatcacaggttacatcctatactacactctggataagaacatgccgatagat
gattgggtgatggaggcgatcagcggggatcggctaacccatcaggttgtggatttgaac
ctcgacaccgtttattacttcaggattcaggccaagaatgccaaaggagttggcccacta
tctgagcccatccacttcagaaccgccaaagtggaacatccagacaagatggccaatgat
caaggccgagggggagaccacgcctactggccatctgataccaacctgattgacaggagc
agcatcaacgagtctcccattggtcagatgcgtccacctcatggcagcgccacgcctcaa
aagaacagtaacctcctggtcatcatcgtagtttccgtgggagctgtcaccgtagttgtt
gttgtcatcgtggcgctcatctgcacccgacgctcctccgcccagcagaggaagaagaga
gcgagccatagtgccagcaagaggaagggcagccagaaggacctgcgacctcctgacctc
tggatccatcacgaggagatggagatgaagaacatggagaaagcccccagcgtcgccccg
tccggacatgattcgcccatccagtcctgccaggacctcccacagatcgcacacagccaa
tcagagagccagatgggcagcaagagcagccactcaggagctgatggtgatgatgtatcc
agcagcatctccactctggagcgctccctggctgccaggagggggacgcgaggcaaaatg
atgattcctatggactcacagccgagcaacacaccggtggtcagtgccatcccggtgcca
gctctggactcctctcagtatcctggtatcctgccttccccttcctgcggcttcactcac
aacaagttcagcctgagaccgatgcctttccccagcctgaccgtggacagaggatacaca
ccagcgatgccttcagactcctccaccaatcccctcctccagcagcagcctgctgcccag
cagccccctcccctcctccccggctcctccgccccgcccggggagcatgttcccggggtt
ggcccagtcccaggggcccctgttcctgttgccgcagctgcagctgaggaagcccaggct
gcgagcggtcggaccatcccaacagcctgcgtgcggcccacccatcctctacgaagcttc
accaacccgctgctgccgccgcccatggggaccatcgaccccaaggtgtacacctccatg
atgccccagtccagtgcaagccttccgaaaccccaggtgaagactgcctctctgggtcag
gccggtaaggctcgctcccctctgctgccagtctcagtccctacagcgccagacttaccg
gaggagggaggaacaaaacctgccgaggattcagctgctaacgtttacgagcaggacgac
ctttctgagcagatggccagtctagaagggctgatgaagcagctcaacgccattactggc
tccgccttctaa

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