KEGG   Micropterus salmoides (largemouth bass): 119914554
Entry
119914554         CDS       T07309                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03082  ATP-dependent chromatin remodeling
msam03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    119914554
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    119914554
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:msam01009]
    119914554
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msam03021]
    119914554
   03036 Chromosome and associated proteins [BR:msam03036]
    119914554
Protein phosphatases and associated proteins [BR:msam01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119914554
Transcription machinery [BR:msam03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     119914554
    SWI/SNF complex
     119914554
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    119914554
   PBAF complex
    119914554
   SWI/SNF complex
    119914554
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 119914554
NCBI-ProteinID: XP_038589848
LinkDB
Position
Unknown
AA seq 368 aa
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDGILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgcaattggctttaagtaaaacgtttgggcagaagccagttaaatttcagttagaacaa
gatggggacttttacatggttgggtcggaggttggaaactatctgcgtatgttcagaggc
tctctgtataaaagatatccatctttatggaggaggctggcctcggtggaggagaggaag
aaaatcgtagcatcgtcacatgccactagtgttactctgctgaaggcatcagaatgtgaa
gagatcttcgagggtaatgacgagaaatacaaggcggtgtccatcagtacagagcccccg
gcttacctcagggagcagaaagcaaagaggagcagtcaatgggttcccacgctgcccaac
agctctcaccatctagatgcagtgccttgctccaccaccatcaatcgcaaccgaatgggc
cgtgataaaaagaggaccttccccctgtgctttgatgaccatgaccctgcagtgatccat
gagaacgcagcccaggtcgaggcgctggttcccattcgtctagacatggagatagatgga
cagaaactgcgagatgcattcacgtggaacatgaatgagaaattgatgaccccagagatg
tttgcagagattttatgtgatgacctggacctgaatcctctggcctttgtgcccgccatt
gcctcagccattcgccagcagattgagtcctaccccactgacggcatactagaagagcag
gcagaccagagagtcatcatcaagctgaatatccatgtggggaacatctctctggtggac
cagtttgagtgggacatgtcagagagggagaactcgccggagtcgtttgccctgaagctg
tgctctgagctgggtctgggcggagagtttgtcaccactatcgcctacagcatccgcggt
cagctgagctggcaccagaggacctatgccttcagtgagaacccactccccacagtagag
attgccatccgcaacacaggtgatgcagaccagtggtgcccccttctggagaccctcaca
gatgctgaaatggagaagaagatccgagaccaagacaggaacacaaggcgtatgagacgg
ctggccaacactgctccttcctggtag

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