Micropterus salmoides (largemouth bass): 119914792
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Entry
119914792 CDS
T07309
Symbol
otpa
Name
(RefSeq) orthopedia homeobox a
KO
K24901
homeobox protein orthopedia
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119914792 (otpa)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
119914792 (otpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
119914792
NCBI-ProteinID:
XP_038590242
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MLSHADLLDARLGELSSPNSGLQLYWMKDAAAELLGHREALKCRLGGGGPDPGHSGELGP
GSDGVEGATMLPGDDISSGGGSNTVQVNSKEQDKQQQQQQQNNSSNQSAAQQSQKQKRHR
TRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNV
FRAPGTLLPTHHGLPQFPSAAAAAAAMGDSLCSFHANDTRWATAGMPGVSQLQLPPALGR
QQAMAQSLSQCSLGAGPPPNSMGLANMSSNGSGLQSHLYQPTFPGMVPASLSGPTNVTGS
PQLCSSPDSDVWRGTSIASLRRKALEHTVSMSFT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgctatctcatgccgacctcctggatgctcgcctcggtgagttatcatcaccaaactcc
ggtcttcaactctactggatgaaggatgccgcggcggagctcctgggccacagggaggct
ttgaagtgcaggctcggcggagggggacctgacccaggacactccggagagctcggccca
ggctcggacggcgtggaaggggccacgatgctcccgggcgatgatattagcagcggcgga
ggatccaacacggtgcaggtcaacagcaaagagcaggataaacagcagcaacagcagcag
cagaacaacagctccaaccagtcggcagcgcagcagtcccagaaacagaagcggcaccgg
acccgcttcaccccggcgcagctcaacgagctcgagagaagcttcgccaaaacgcactac
ccagatatcttcatgcgggaggagctggcgctgaggatcggtctgacggagtccagagtg
caggtctggtttcagaaccgacgcgccaagtggaagaagcgcaagaagaccaccaatgtc
tttcgggctccggggactctcctgccgacgcaccacgggctgcctcagttcccgtctgcc
gcggcagcagcagcggccatgggcgacagcctctgctcctttcacgccaacgacacccgc
tgggctacggcagggatgcccggcgtgtctcaactgcagctaccgccggctctcggccgc
cagcaggccatggcgcagtccctgtctcagtgtagtctcggcgcagggccgccgcccaac
tccatgggtctagccaacatgtcgtcaaacggctccgggcttcagtcgcacctctaccag
cccactttccccggtatggtacccgcgtccctgtcgggcccgaccaacgtgaccggctcg
cctcagctgtgtagttccccggacagtgacgtctggagagggacaagcatcgcgtcgctg
cgccgcaaagcgctggagcacacagtatccatgagtttcacctag
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