Micropterus salmoides (largemouth bass): 119914907
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Entry
119914907 CDS
T07309
Symbol
nup188
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119914907 (nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119914907 (nup188)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119914907 (nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup192
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
119914907
NCBI-ProteinID:
XP_038590367
LinkDB
All DBs
Position
Unknown
AA seq
1751 aa
AA seq
DB search
MAGTKMAESGISVRSCRELWTILLGRSALREPAQIEAELDRHWDRLHQGLTYYKPPSPSS
AGKVKENKDVAQPLKDFGLRISKLLGLDEQQSVQLLQCYLQEDYRGTRDSLKVVLKDERQ
SQALLLKMADYYYEERTCLLRCVLLLLTYFQDERHPYRAEYSNCVSKLEKDLVSNYQSQF
EKLFKAEAPTWETHGNLMTERQVSLWFLQCLREQSLLLEIIFLYYAYFEMSPSDLLTFTK
MFKEEGFGLRQTNRHLVDKSMDALVDRIGYLSSLILVEGMDIDFLHKCALEDCTDQHQFS
SAPDVIKEMDQLLLTFGDIPHHGPVLLAWVLLRHTLRPDESSPVIRRIGNTALQLEVFKY
ISTMLKGLGVTGNNCTASTAKMCIYGLLSFVITSFEEESLQTGGVVTQCSHLIDAACDVL
SAPSLAEVFWEMKPNMGLGMILDNAVGMFPHKIGPLLQLLTALLSNKSTVKKVYNFLDKM
SFYTQVYKHKPNDVISKDDETLWRRQTPKLLYPLGTGQTNLWIPQGVLGQVMIGGEQGYV
VRWDYSYSSWTLFTCEVEMLLHVVSTADVLAHCARVKPILDLVHKIISTDWTVSDCLLPL
TXRIYMLLQRLTSVINPPVDVIASCVNCLSVLAARMPGKVWSSLHHTGFLPFASNPLTST
AQCVSAEGMKAGNYGNLLVQIEQPRGEYAVTIAFLRLITTLVKGQLGSTQNKGLIPCVLL
VLKEMLPTYHKWRYNTYGVRERIGCLILELIHAILNLSPEGEDQGSTPTLQSLCIYSLAN
TEAGQAVVNIMGVGVDTIDVVLAAQPSSCVSEGPGQILIQTVKLAFSVTNNVIRLKPPSD
VVSPLEQALTQHGGHGNNLIVVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSIYACLGN
DAAAIRDAFLTRLQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSEGSKEFL
LGEWSCLHVVLDLIDSKQQGKYWCPPLLHRAALAFLLALWQDRRDSAISVLRKKERFWEN
LTTPLFGTLTPPSDTTEPCVLETCAFVMKIIGLEIYYVVSGSLEQSLKDGLQKFSSARRY
EYWSQYVKSLVCHVAEMEEEGICYFPETQMLISAWRMLLILSTSHSDVMQVTDDTTKLKL
FMDVLDGAKAALTTPMSVPCLRLGSMMATLLLILLKQWRCVVATAPDILSPLSLILESVL
QADQQMMERTKAKVFSALISVLQIQGLNGGDISQLPQLLLSVCETAKDEALALIDSTRHM
SQTGDTVEDEDCMETDSPRGPQKDKEMGVCVLALHLAKELCRTDEDGEHWVSVMRKVPVL
PSVLSAVELSLRSKHNLYFTEAALHLLLTLARTPQGAAAVAGAGVIQTICLPLLSVYEVS
SNGASQSFSRKSQDTACWPGVYRLCMSLMESLLKTLRYNFINEALDFVGVHQERILQCLN
AVRTVQSLACLDEADHTVGFLLQLSSFCKEWQFHLPKLLRDIQVNLCYLCQTCTYLLHSK
KMLHHYLQAKNGEALPPGPLPRTQRPPQTPSKEAAGGGEREEAEQKALLAVQCSLLKILS
KTLATLQHFTPDCCQILLDQSMDLAEYRTLFVLSFTTPAFDPDVAPSFGTLLATINVALS
MLSEMEKKKEPVSLSIASLASSEEIQALKSLLMFTMENCFYVLISQAVRCLKDPSILPRD
KQRLKQELSSELSTLLSSLSRYFRRGSPSSPASSILPSAQSKPPTPGSKGSHEGQEPFIQ
LVQAFVRLVQR
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaacgaagatggcggaatcggggatcagcgtcaggagctgtcgagaattatgg
accatactgctgggaagatctgcattgcgagagccggctcagatagaggcagagctggac
agacactgggacagactgcatcaaggactcacctactacaagccacccagcccatcctct
gctgggaaagtgaaggagaacaaagatgttgcacaaccattgaaggattttggcctgagg
atcagtaaactattgggtcttgatgagcagcagagtgtgcagcttttacagtgctaccta
caggaggactacagaggaacccgtgactcgttaaaggttgttctcaaggatgagcgacaa
agccaggcactgctgctaaagatggctgactattactacgaggagcgcacatgtctgctc
agatgtgtcttgctgttgctgacatactttcaggacgagcgacatccctacagggctgag
tacagtaactgtgtcagtaagctggagaaggacctagtgagcaactaccagtcacagttt
gagaagctcttcaaagcagaagcaccaacatgggaaactcatggaaacctcatgactgag
aggcaggtgtcactatggttcctgcagtgtctgagagaacagtctctgctgctggagatc
atctttctgtattacgcttactttgagatgagcccgtctgacctgctgacctttaccaaa
atgttcaaagaagagggcttcggtttgcggcagaccaacagacacctagtagacaaaagc
atggacgcgctggttgatcgcattggctatttgagctctctcatcctggtcgagggaatg
gacatagacttcctacacaagtgtgccctagaagattgtacagatcagcatcagttctcc
agtgctcctgacgtcatcaaggagatggatcagctgctgctgacatttggtgacatccct
catcacgggccagtgctgctagcctgggtcctgttgagacacacactgcgaccagacgag
tccagccccgtgatcaggaggatcggcaacaccgccctgcagctggaggtgttcaagtac
atttcaaccatgctgaaaggccttggagtcacagggaataattgcacagcaagcacagca
aagatgtgtatctacggtctcctctcatttgtgatcacttcttttgaagaggaaagccta
cagactggtggtgtggtgacacagtgctcccacctgatcgatgctgcctgtgatgtcctc
tctgctcccagtctggctgaagtcttttgggaaatgaagccgaacatgggattgggaatg
atcctggacaacgcagtcgggatgttccctcataagatcggaccactgttgcagcttctc
actgcacttctgtcaaacaagtcgactgttaaaaaggtgtacaactttttggacaagatg
tccttttacacacaagtttacaaacataaacccaatgatgtcatctccaaggacgatgag
actctgtggaggagacaaacacccaaactcctctaccctctcggcacagggcagactaat
ctttggataccgcagggagtgctgggccaggtgatgattggaggcgagcagggctacgtg
gttcgctgggactactcctacagctcctggactctcttcacctgtgaggtggaaatgctg
ctccatgttgtttccactgcagatgttttagctcactgtgcacgtgtgaaacccatcctg
gatctggtccataagatcataagcacagactggaccgtgtcagattgtttgttgcctctc
acgntccgcatctacatgttgctgcagaggttaacatcagtcatcaacccaccagtggat
gtgattgcctcctgtgtgaactgcctctctgtactggctgcaaggatgcctgggaaggtg
tggtccagtctgcaccacacaggttttctcccctttgcctccaaccctttgaccagcacg
gctcagtgtgtaagcgctgaagggatgaaggcaggtaactatggcaacctgctggtccag
atcgagcagccaaggggggagtatgctgtgaccatcgccttccttcgtctcattacaacc
ctggtcaagggtcagcttggcagcactcagaacaaaggcctgatcccctgtgtgctgctg
gtgttaaaggagatgttgcccacgtaccataagtggcgttacaacacctatggagtcagg
gagaggataggctgtcttattttggagctgatccatgccattctcaatctcagcccagag
ggagaagatcagggcagcactcccactctgcagtctctgtgtatctacagcctggcaaac
actgaggctggacaggcagttgtcaatatcatgggagttggagtggataccatagatgtg
gtcctggctgcacagcccagcagctgtgtctctgagggtcccggtcagatcctgatccag
acagtaaaacttgccttctctgtcaccaacaatgtcatccgtctgaagccgccatctgac
gttgtgtcccctctagagcaggccctgactcaacatgggggtcacggcaacaatctcata
gttgtgttggccaagtatatataccataaacatgaccctgcgctgcctcgcctggcaatc
cagctgctcaaaaggctcgccactgtggctcccatgtccatctacgcttgccttggtaac
gacgcagcagccatccgcgacgcattcctcactcggctgcagagcaagacagaagacatg
aggatcaaggtcatgatccttgagttcctcaccgttgctgtggaaacccagcccggcctc
attgagctttttctcaacctggaagtcaaagatggaagtgaggggtcaaaggagtttctg
cttggtgagtggagctgtcttcatgtggtgttggacttgattgactccaaacagcagggg
aaatattggtgtcctccgctgctccaccgagcggcactggccttcctccttgcactctgg
caggatcgcagagacagtgccatctctgtgcttcgtaaaaaagaaaggttttgggaaaat
ttgacaacacctctctttggaacccttaccccaccttcagataccacagagccttgtgtt
ctggagacgtgtgcttttgtcatgaaaatcatcggcctggagatctactatgttgtcagt
ggttccttggagcagtctctgaaagatgggcttcagaagttttccagtgcacgacgatac
gagtactggtcccagtatgtcaagtctctagtgtgccacgtggcagagatggaggaggaa
ggcatctgttactttcctgagacccagatgttgatctctgcctggcggatgctgctcatt
ctttccactagccattccgatgtgatgcaggtaacggatgatacgaccaaactgaagctt
ttcatggatgtcctggatggggccaaagctgctctgactacacccatgtctgtgccatgt
cttcgtcttggatccatgatggccacactactactcatcctcctcaaacagtggagatgt
gtggtggcaacagctcctgacatcttgtctcccctctcgctgatcctggagagcgtcctg
caagctgaccagcagatgatggagaggaccaaagccaaagtcttctctgcactcatatct
gtacttcagattcagggactcaatggtggagatatttcccagctgccccagctattgctg
tctgtgtgtgagacggcgaaagacgaggcattggcgttaattgacagtactcggcacatg
agccagacgggagacacggtggaagacgaggattgcatggagacagactctccccgcggc
ccacagaaggacaaagagatgggtgtgtgtgtactagcattgcacttagcgaaggagctg
tgtcgcactgatgaagacggtgagcactgggtgtcagtgatgaggaaggttccagtcctc
ccctcggtgctcagtgctgttgaactaagcctgcgatccaaacacaacctctacttcact
gaggctgcgcttcacctgctgctcacactggcccgcactcctcagggggcagcagctgtt
gctggagcaggagtcatccagactatctgcctccctcttctgagcgtctatgaggtgtct
tcaaatggtgcatctcagagtttctcccggaagtcccaggacactgcctgctggccagga
gtgtaccgcctctgcatgtcattaatggagagtctgctcaagactctgcgttacaacttc
atcaacgaagccctggactttgttggagtacatcaagaacgcattctacagtgtctgaat
gcagtgcgaacagtgcagagcttggcgtgtttggacgaggcggatcacacggtcggtttc
ctactgcagctctcaagcttctgtaaggagtggcagtttcacctgcccaaactgctcaga
gatatacaggtaaacctgtgttatctgtgccagacctgcacgtacctgctccacagcaaa
aagatgctccatcactacctccaggctaaaaacggtgaggcgttgccccccgggccccta
cccaggacacaacgcccccctcaaaccccatcgaaagaggcagcaggtggaggggagaga
gaggaagcagagcagaaggccctgctggctgtacagtgcagtcttctgaagatcctcagc
aaaaccctggcaactctgcagcacttcactccagactgctgccagatactcctggaccag
agtatggacctggcagagtatcgaaccctgtttgtgctcagcttcacaactccagcgttt
gaccctgatgtggctccttcatttggaaccctgctggccaccatcaacgtggccctgagc
atgttgagcgagatggagaagaagaaagagccagtttccttgagtatagcttcactggcc
tcatcagaagagatccaagctctgaagtccttgctaatgttcaccatggagaactgtttc
tacgtgctgatctctcaggctgttcggtgtctcaaagatccctccatcctccctcgagac
aaacagaggctcaaacaggagctcagctcagagctgagcactcttctctcgagcctgtcg
cgctacttccgcaggggctcaccatcgtctccagccagcagcatcctcccctccgcccag
tccaaaccacccacaccaggatccaagggaagccacgaaggtcaggagccattcatccag
ctcgttcaggcatttgtcagacttgtgcagagatag
DBGET
integrated database retrieval system
