Micropterus salmoides (largemouth bass): 119915412
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Entry
119915412 CDS
T07309
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119915412 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119915412 (usp42)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119915412 (usp42)
Peptidases and inhibitors [BR:
msam01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119915412 (usp42)
Ubiquitin system [BR:
msam04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119915412 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
119915412
NCBI-ProteinID:
XP_038590859
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MTIVDRSSEKSDHKSVGCKRSPFTSGDVGMDGSCSSSWAVGATMPSDSPRLKASGGCLGP
TPGAAVYNSTPSSVDRPKEQVISSDDGIDLPQKVLFPPERLNLKWTQVHRIGAGLQNMGN
TCFLNSALQCLTYTPPFANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRNSNVLTLSLKRFANFSGGKITKDVKYPEYLDLRPFMSQSQGDPQVYGLYAV
LVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKSSDVKNAG
DYSHMSHNPGIPGQSSPRPVVIPRINTTVHHNNIGFIGPQLPPHMNKSTLHVNGNGSLRD
YPTNSKPSTSSSVVGKPSHGPASSTSSISHSISRPTMIPDHDKRQKLSFFIGQSKQNRPS
SSSYSQPSSASSSSSSSSLSSSQSTSDVHSDIRFVPRQLHRVNGTSCSNGDHRTGGNGAS
FLVPYGQESSEESDQENGGTLDNGRLAKSHLNGNNRAGEVLDNSLNATNGESGVHHNGNG
LNGSTHGVSKSSQNGHHYGHHKVNGHKTPDKVSGSSHSSSSSVASVAANGLDSDHSETSN
EAHTSVSSQASSSQSIHPAASESLHLSTPDTRATTVSEPRPQLTATSTLSSPPSATATKT
HCVTSRESASSCPAALSIPPDCSQGTSGASAALQNVSKSGDKAMDLPQTNDPSAGTERRT
DVKEQHQSKPSSRGNDGQNSRDKERDRLYSDWSRDKERHYRDRSQERESDSDRHRYRRDY
RDHQRPSYRDRLPPHDRNYRDGESERRWVRPVHHPRERDRDRCSHHYHYYHYQRSREDRG
RGRRGHSYLYRDESRSRSRWQEESRESRGVKDKSNGRERDYYTSKEEASSPATVPETSTK
SKGSPSRARLSTSESAPNREDQNHKRTTNPLSKDREDSSEACRSKKHKKSKKKKKSKDKE
RHRESGSSDVDSDRATETKKKKKKRRQRDNEAEQHSPRAARKNGSSEEKESRKRHYNDIK
DTKHDNGLSLEKRRRTDYADGSSDRLLPSHHTSPTNGSTHRHVNGYTGNGYSQTNSDSLR
FSSGLKH
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagaaaagtctgaccacaagtcagtcgggtgtaagcga
tctcccttcaccagtggtgacgtggggatggacggcagctgttccagcagctgggcagtg
ggagccaccatgcccagtgactctccgaggctcaaggcttcagggggctgcctgggccca
acgcctggagccgcagtctacaacagtaccccctcctctgtggaccggcctaaggagcaa
gtgataagcagtgatgatggcattgacttgccccagaaggtcctcttccctccagagcgg
ctcaacctgaagtggacccaggtccaccgcattggtgcgggcttgcagaacatgggaaac
acttgcttcctcaactcagccctacagtgtctcacctacacccctccatttgccaactac
atgctgacacgtgagcactccaaaacgtgtcacgagccggggttctgtatgatgtgcacc
atgcaaaatcacatcattcaggtttttgccaactctgggaatgttataaagcccattggt
gtgctcaatgagctcaaaaggattgcaaagcacttccgctatggaagccaggaggatgcc
catgagttcctgcgatacacagtggatgctatgcaaaagtcctgcttacctggaaccaaa
ttggacaggcaaacgcaggcaaccactttcattcatcaagtttttggcggatatctaagg
tccagagttaaatgtttaaactgcaaagcagtctctgatacatttgacccttttctggat
attactctggaaattaagacggctcccagtgtctccaaagctctcgagcagtttgtcaaa
cccgaacagctggatggagaaaacgcctacaagtgcaccaagtgcaaaaaaatggtcaca
gcctcaaagagatttaccatccaccgcaactccaatgtgctcaccctctcactcaaacgc
tttgcaaactttagtggaggcaaaatcacaaaggatgtgaaatatccagagtatctggac
ctgcgtcccttcatgtctcagtcccaaggggacccccaggtctacgggctgtatgctgtg
ctggtccactctggattcagctgtcatgctggacactacttctgctatattaaggcaagc
aatgggcagtggtatcagatgaacgactcctccgtgtctgtcagtgacatcaggtctgtt
ctcaaccagcaggcctacgtcctcttctacataaagtccagtgatgtgaagaatgcaggg
gactacagccacatgagccataacccaggcatccctggtcagtcatctccacgtccagtg
gtgataccacgcatcaacaccactgtccaccacaacaacattggtttcataggtccccag
ctgccaccacacatgaataagagcactctccacgttaatgggaatggatctctgagggac
tatccaactaactccaagcccagcaccagcagcagtgttgtgggaaaacctagtcatgga
ccagcctcatccacttcttccatatctcactcaatcagccggcccacaatgatcccagat
catgacaaacggcagaagctttcattctttattggacaaagcaaacagaaccgcccgtcc
tcgtcctcttacagccagccgtcctctgccagtagcagctcctcctccagctctctgtca
tcctcacagtctacctcagacgtccactcagacattcgctttgttccacgtcagcttcac
cgcgttaacggcacgtcttgtagtaacggggatcaccgcaccggaggcaatggagcgtca
ttcttggtgccgtacggccaagagtcttcagaggaatcggaccaggagaacgggggcact
ctggataatggccgtttagccaagtctcaccttaatggaaacaacagagcaggagaggtc
ttggataattctcttaacgccaccaacggagagtcgggagtgcaccacaatggtaacgga
ttaaatggatcaacccatggcgtctctaaatccagtcaaaatgggcaccattatggacac
cacaaagtgaatggacacaaaactcctgataaagtctctggcagtagtcatagcagttca
tcctcagtggcttctgttgctgctaatgggctagacagcgaccatagtgaaacaagcaac
gaggcacacacttctgtctcatcccaggccagttcttctcagagcatccatcctgctgct
agtgaaagcctgcacctctccactcctgacacaagggctacaactgtgtctgaaccccgg
cctcagcttactgccacctccactcttagctctccaccttcagccactgctacaaagacc
cattgtgtcacatctagagaatctgcttcctcttgccccgcggccttatccatcccgcca
gactgctctcaaggcaccagtggggcctctgcagctctacagaatgttagtaaaagtgga
gataaagcaatggatctaccacagaccaatgatccgtcagcagggactgaaagacgtaca
gatgttaaggagcaacaccagtccaagcccagttctagaggcaatgacggacaaaattcc
cgtgacaaggagagagacagactgtactctgactggagcagagacaaggagagacactac
agggacaggagtcaggaacgagaaagtgacagtgaccgtcatcggtacagacgggactat
cgagatcatcagcgcccctcatacagggatcgtttacctcctcacgatcgtaactacagg
gacggggagtctgagcgtcgctgggtgcgacctgttcaccatcccagggagcgtgatcgt
gacaggtgctctcaccattaccactactatcactaccagcggtccagagaggacaggggc
cgtgggcggagggggcacagttatctctaccgtgacgagtctcgtagtcggtctaggtgg
caggaggagagtcgagaatcccggggggtaaaggacaagagcaacggcagggaaagggac
tattacacgtcaaaggaggaggcgtcctcgcctgccacagtgccagaaacctccacaaag
tccaagggctcgccctctcgagctcgtctctccacgtctgaatctgctccaaacagggag
gatcagaatcacaagaggactactaaccccctgagcaaggacagggaggacagctctgag
gcctgtcgctctaaaaaacacaaaaagagcaagaaaaagaagaagtcaaaggacaaagag
cgacaccgtgagagtggaagctccgatgtggattcagacagagccactgaaacaaaaaag
aagaagaaaaagaggaggcagcgggacaacgaagccgagcagcacagcccaagagcagct
cggaagaacggaagcagtgaggagaaggagagccgcaagcgacattacaatgacatcaag
gacactaaacatgacaatggtctttcgctagaaaagcgccggcgcacagactatgctgat
ggcagcagtgaccgtctgctgccctcccaccacacctcgcccacaaatggttcaactcac
cgccatgtcaacggatacacaggaaacggttacagtcagaccaatagcgactccctcaga
ttctccagtggcttgaaacactga
DBGET
integrated database retrieval system
