Micropterus salmoides (largemouth bass): 119915501
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Entry
119915501 CDS
T07309
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119915501 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119915501 (gspt1)
03012 Translation factors [BR:
msam03012
]
119915501 (gspt1)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119915501 (gspt1)
Translation factors [BR:
msam03012
]
Eukaryotic type
Release factors
119915501 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119915501
NCBI-ProteinID:
XP_038590975
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MDPSDTAPDSWELEEDAEAAAGLPTAFAALNVNAKPFVPNVNAPVFVPSFLQANVVEIPA
SDGAPDPVASMEVAETAAPVENGSTEADVTTEEETWEQKEEPGGGGGGGGQEDLESGGVC
EEGGAAGKEDEEMMEEEEEEMPMPKVAPAPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMY
LTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTI
LDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLI
VLVNKMDDPTVNWSLDRYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPVSEC
PWYTGLPFIAHLDSLPNFTRSNDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMP
NRHTVEVLSLLSDDVETDDATPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTFDAQ
IVIIEHKSIICPGYNAVLHIHTCIEEVQISALICLVDKKTGEKSKTRPRFVKQDQVCIAR
LRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagcgacacagccccggattcgtgggagctggaggaagatgccgaggccgcg
gcggggctaccgaccgccttcgccgctctcaacgttaacgccaagccgtttgtccctaac
gttaacgccccggtctttgtaccgagtttccttcaagccaacgtcgtggaaatcccggct
tcagacggtgcccctgatccagttgccagcatggaggtggcagaaacagccgctccagtg
gagaatggaagcacggaggcggacgtgaccacagaggaagagacgtgggagcagaaggag
gagcccgggggaggcggaggaggcggaggacaggaggacctggaatcaggaggagtctgt
gaggagggcggtgccgctgggaaagaggatgaagagatgatggaggaggaggaggaggag
atgcccatgcccaaagtggctccggcgcctccagacgcccccaagaaagaacacgtgaac
gtggtcttcatcggtcacgtggatgctggtaaatcaactattggaggacagatcatgtac
ctaactggaatggtggagaagcgaaccctggaaaaatatgaaagggaagcgaaagaaaag
aacagggagacatggtacctgtcgtgggctctagacacaaaccaggaggagagagacaag
gggaagacagtcgaggtcgggagagcttacttcgagactgagaaaaaacatttcactatc
ctggatgcccccggacacaagagctttgtccccaacatgattggtggagcgtcacaagct
gacctggcagtcctggtgatttcagcaaggaaaggggagtttgagaccggctttgagaag
ggaggacagacacgggaacatgccatgctggctaaaacagcaggagtcaagcatctcatt
gtcctggtcaacaagatggatgaccccactgtcaactggagcctagataggtatgaagag
tgtaaggagaagctggtgccatttctaaagaaggtgggcttcaaccccaagaaggacatc
cactttatgccttgctccggactcacaggtgccaacctcaaggaccctgtatctgaatgc
ccctggtacacgggtttgccatttattgcccatctggacagtttgccaaacttcactaga
tccaacgatggaccagtcagactacctatcgtagacaaatacaaagatatgggcacagtt
atcctcgggaagctggagtcaggatccatcagtaaagcccagcagctggtcatgatgcca
aacaggcacaccgtggaggtcttgagcctgctgagcgatgatgtggagacagatgatgca
actcccggggagaatctgaagttgaggctgaagggcatcgaggaggaagaaatcctccct
ggttttatcctctgtagccctgacaacctatgccactctggacgcacctttgacgcacag
attgtcatcattgagcacaaatcaatcatttgccctggttataatgcagtccttcacatc
catacctgcattgaagaagtgcaaatctcagccttaatctgtctggtggacaagaagacg
ggggagaaaagcaaaacacgaccacgctttgtgaagcaggaccaggtgtgtatcgccagg
ctccgggcagcaggagtcatctgcttagagaccttcaaagacttccctcagatgggacga
ttcacgctgcgagacgaaggcaagactatcgccatcggcaaagtgctgaagctggtgcca
gaaaaggactaa
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