Micropterus salmoides (largemouth bass): 119915670
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Entry
119915670 CDS
T07309
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119915670 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119915670 (smarcd2)
03036 Chromosome and associated proteins [BR:
msam03036
]
119915670 (smarcd2)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119915670 (smarcd2)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119915670 (smarcd2)
PBAF complex
119915670 (smarcd2)
GBAF(ncBAF) complex
119915670 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
119915670
NCBI-ProteinID:
XP_038591254
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MASRGVFTSSSMNPNMHPMNIGHAAGMRIPGMPQPSAGYPRNMNSSPQYPQRSGMPPNRV
GGPMGSMGGQLPGPSYGGGNMSMRPGMGPPSMDASRKRFLQQHQQQQQQQQQDALGGLRR
GAKRRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRK
LRIYISNTYTPSKPEGEEAEKVSSWELRVEGKLLEEPGKQKKKFSSFFKSLVIELDKELY
GPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHT
QTRASIMQALWLYIKNNKLQDSHEKEYINCNRYFRQIFACPRMRFSEIPVKLASLLQHPD
PIIINHMISVDPTDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIAALEMKIHETIE
YINQLKTERDFMLSFSNNPQDFIQDWLKSQSRDLKLMTDVTGNPEEERRTEFYQAPWVPE
AVGRYVYYRVQQRRQELEQVLGIRLT
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagaggagtcttcacgtcttcttcgatgaatccgaatatgcaccccatgaat
attgggcatgctgcgggcatgaggatcccaggcatgccccaaccgtcggcgggatacccc
cgcaacatgaacagctccccccagtacccccagcgctcagggatgccacccaacagagtg
gggggcccaatggggtcaatggggggtcagctgcctggtccttcctatggtggtgggaac
atgtccatgcggccaggcatggggcctccaagcatggacgcctcgaggaagcggttcctt
cagcagcatcaacaacagcagcagcagcaacagcaagatgcactgggaggcctcagacga
ggggcaaaaagacgtaagatggccgacaaggttctcccacagaggatccgagacctggtc
ccagagtcccaggcctacatggatctcttggcctttgagaggaaactggatcagaccatc
gcccgaaagcgcatggagattcaggaagccatcaagaagcccattatgcaaaaacgcaag
ctcaggatctacatttctaacacgtacacacccagcaagcctgagggtgaggaggcagag
aaggtgtcctcgtgggaactgagagtggagggcaaacttctggaggaacctggcaagcag
aagaagaagttctcatctttcttcaaaagcctggtgatcgagcttgataaggagctctat
ggacctgacaaccacttagtagagtggcatagaatgcccaccactcaggagaccgacggt
ttccaggtcaaaaggcctggcgatgtgaatgttaaatgcacccttctgctcatgctcgac
caccagccccctcagtacaaactggacccgcggttggctcgtctgctgggtgtgcacaca
cagacgcgggccagcatcatgcaagctctttggctctacatcaagaacaacaagctgcag
gatagtcatgagaaggagtacatcaactgcaaccgctatttcagacagatctttgcctgt
cctcgcatgaggttctctgagattcccgtgaaactggccagcctgctgcaacaccctgac
cccatcattatcaatcacatgattagtgtagaccccacagatcagaagaagacagcatgc
tatgacattgatgtggaggtggatgatccactgaaaggccaaatgaacagtttcctctcc
tctacaaccaaccaacaggaaattgctgcactggagatgaagattcatgagacaattgag
tacatcaaccagctgaagactgagagagactttatgctgagcttcagcaacaatccacag
gacttcattcaagactggctcaagtctcaaagcagagatctgaagttgatgacagatgtg
acaggaaacccagaggaggagaggaggactgagttctaccaggcgccctgggtaccggag
gcagtaggaagatatgtttactacagagtgcagcagaggagacaagagttggagcaggtg
ttgggtatccgactcacctaa
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integrated database retrieval system
