Micropterus salmoides (largemouth bass): 119915730
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Entry
119915730 CDS
T07309
Name
(RefSeq) integrin beta-4-like
KO
K06525
integrin beta 4
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
msam04810
Regulation of actin cytoskeleton
msam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119915730
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119915730
09142 Cell motility
04820 Cytoskeleton in muscle cells
119915730
04810 Regulation of actin cytoskeleton
119915730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119915730
04515 Cell adhesion molecules [BR:
msam04515
]
119915730
04090 CD molecules [BR:
msam04090
]
119915730
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119915730
Exosomal proteins of bladder cancer cells
119915730
Cell adhesion molecules [BR:
msam04515
]
Integrins
Integrin beta subunits
119915730
CD molecules [BR:
msam04090
]
Proteins
119915730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
SEA
Motif
Other DBs
NCBI-GeneID:
119915730
NCBI-ProteinID:
XP_038591375
LinkDB
All DBs
Position
Unknown
AA seq
1947 aa
AA seq
DB search
MGRWTLHLSVGLGLLALLLSCCYAEENYCFASRAKTCSECLQSGKGCAYCPDETFNGPRC
DLHENILAHGCSTAAVITAESSMTMERKEKINARIQQSQVSPQQMSMTFLPGEEKMVDVE
VFAPTKGPLDLYILMDFSNSMADDLDNLKRMGKELAQVVEKLSEDYTIGFGKFVDKVIEP
QTDMRPSKLKQPWPNSDPPFSFQNVIKLTSNLDFFTSELQKERISGNLDAPEGGFDAILQ
AAVCGDKIGWRNHSTHLLVFSTESAFHYEADGANVLSGILPRNDEQCHLDAAGKYTMDIH
QDYPSIPTLIRLLGKHNIIPILAVTNHSYTYYKKLQEYFPIAEVGLLQEDSSNILQLMEA
AFESIRSKMSIRAEEKPKAFEAQFMHMDGSVAQYGAFDFKPGSIGKFKTRLKAQRMINDV
PVCQVDPNEKEGMTRIKPTTFNAAVNIKASVLCPTCECEKTPIIKADRCNGNGDLVCGKC
QCYDGWLSTFCNCSASASAQDTNQCKGPDMKEACSGRGDCLACGTCVCYNPDQFEGPYCQ
YDKTQCQRYGGFLCNDRGSCVMGRCACTQGWEGNACECPKSNLTCLDSKGGVCNGRGKCV
CGRCECLNSGMEMTSTCEPNFQAQLGVCEGTRSCVQCQAWKTGEKKDKEECDKCPFKIVM
EENLKESEKVLDSCSFRDEDDDCTYYYTVENPKELTDKDLEVRVRKKKDCPPAGLLWLLP
LLLFLLLLLALLLLCCWKFCACCKTCLQSCLALLPCCRKSPYVVFSPGRMVGFKEDEYLL
RQSLLTTDHLDTPMVRTGPPKGTDIVRWKVTDNVHRGPNHPQAMIKPNPKETIQFPISLR
LNKLFSETLSRPDSKDAEQLRKEVADNLNEVYKQIPGAQKVQKTSFRMQRNAGKRQDFTI
MDTVLSAPRGSYPDIVRLTEKNVQSGNINDLKVVPGYYTVATDREAVGAIEFQEGVESVD
VHVPLFVKDEDDDKKSLQVEATDVPLGIAEIGKRLVNITIIKEHATSVFSFLQPAYTYSR
QDGVANIPISREIIEDGRTQVTYRTRDLTAKDKKDYVTVEGDLNYGPGETQKMVPVHLLE
LGEKDGLLEDKPVKQFVMDLSNPRQGAKLGRYPRTTVTIADQPEPSVVMFKRGAQNFTTS
DLSYNIPVVRTRNLDSPVTVKWRTKEALRYKQSGLLMFGPGETENNIVIERPVEPETFQL
ELSDPSSNAMIGERKTTIVNVIDHNVERDIDQKQQLGYINQKALSPGIHLPAPGNPKARA
TGPRSIRLNWDPPPGNPMGYKVKYWIYGDPEKDAQVLDVKTPQAELTNLYPYCDYEMRVC
GYNAVGDGYDTDMVACQTLEDVPGEPGRLAFNVISPTVTQVSWAEPAETNGNIVAYEVVY
TPIDDLTTTGPAKKVKIDNPKKRMLLIENLQTAQTYLYQVRAKNSVGWGPFRDATINLAS
QPARPLSIPIIPDIPIVDAEAGDEYDSYLMYSNEVMKSPTGSKTPSVSGDDYTVNGKWEQ
NFLFPGGSGTRNLSASSSPMSTLSSNYRGAGGSFTTETNTTHYMSGQGGSRRLDMIGGGG
VHTSEVIMRKRSENRGYTDENIRDSIVIGDVSSQISDISGLGYIGMQSSSQSQFSYSLSQ
GSRARTQSSDVNEALYNLDRVLQDARVSPGIPDTPSRLVFSALGPTALKVSWQEPHCEKD
ILGYCVLYQLLNGGEVKRIDVMNPAENSVIIQDLLPNHSYLFKVMAQSQEGWGPEREGVI
TIESAVDPKSPLSPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYVV
TCEQLHGGGDVRSFQVNGDSAETSLTVPNLTENVPYKFKVQARTTQGFGPEREGIITIES
QDGSALSHYNSQSMVRREVFQMPTDVSTRTNISHTMINDPYFSDGMMMTTQHTETSGLVT
RQITKEVVQRSVVGGATVSKKMFYTSK
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacatctctcagtggggcttgggcttctagccctcctgttgagc
tgctgttatgctgaagagaactactgctttgcttccagggccaagacctgctcagaatgc
ctgcagtctgggaaaggctgtgcctactgccctgatgagacctttaacggccctcgctgt
gacctgcacgagaacatacttgcccatggctgcagtactgcggctgtaatcacagctgaa
agcagtatgacgatggaaagaaaggaaaaaatcaacgcaagaattcagcagtctcaagtg
tctccacagcagatgagcatgacctttctgccaggggaggagaagatggtggatgtggag
gtgtttgctccaaccaaaggccctctggacctttatattcttatggacttctccaattct
atggctgacgatttggacaacttgaagaggatgggcaaagagctggctcaagtggtagag
aagctgtcagaagactacaccattgggtttggaaagtttgtggacaaagtgatcgagccc
cagactgacatgagaccctccaaacttaagcagccgtggcccaacagcgaccctccattc
tctttccaaaacgtcatcaagctgaccagtaatttggatttcttcaccagtgagctccag
aaggagagaatttcaggcaacctggacgctcctgaaggaggttttgatgccatattgcag
gctgcagtttgtggggataagatcggctggcgcaaccacagcacacatctcctggttttc
tccaccgagtcagccttccactacgaggctgatggtgccaacgtgctgtcaggcatcctg
ccgcgcaatgacgagcaatgccaccttgacgcagcgggcaagtacacaatggatatacac
caggattacccctcaatacccacactgatccgtctgctgggcaaacacaacatcatccct
atccttgctgtcaccaaccactcctacacatactacaagaagctccaagagtatttcccc
attgctgaggtcggtctgttgcaagaagactcgtccaacatcctgcaactcatggaggct
gctttcgagagtatccgttctaagatgagcatccgtgcagaggagaaacccaaggcgttt
gaggcacagttcatgcacatggatggaagcgttgcacaatacggggcttttgatttcaag
ccaggctcaataggcaagttcaagacgcggctcaaagcccagcgaatgatcaatgacgtg
cctgtctgtcaggtggatccgaacgaaaaagaggggatgacgagaatcaaacctacgacc
tttaacgctgccgtcaacattaaggcttcagttttgtgtccaacctgcgaatgtgagaag
acgcccatcattaaagcagacagatgcaacggcaacggagacctggtgtgtgggaagtgt
cagtgctatgatggctggctgagcacattctgtaactgctcagcgagtgcttcagctcag
gacaccaaccaatgtaaaggtccggacatgaaggaagcttgttcaggccgcggagactgc
ctggcgtgtggaacctgtgtgtgctacaacccggatcagtttgaaggaccctactgtcag
tacgacaagacccagtgtcaaagatatggaggcttcctctgcaacgaccgtggctcttgc
gttatgggtcggtgtgcgtgtacacagggctgggagggcaatgcctgcgagtgtcccaag
agcaacctgacctgtctggacagcaagggcggtgtctgcaatggccgaggtaaatgtgta
tgcggccgctgtgagtgtctgaactctggtatggagatgacttcaacatgtgagccaaat
ttccaggctcagttgggagtgtgtgagggtacgaggagttgtgtccagtgtcaggcctgg
aaaacaggagagaagaaagacaaagaggagtgtgataagtgccccttcaaaattgtcatg
gaggagaacctcaaagaatcggagaaggtgcttgattcgtgcagtttccgtgatgaggat
gacgactgtacgtactactacactgttgaaaaccctaaagaactgacagataaagacttg
gaggttcgggtgcgcaaaaagaaagattgcccccccgctggcctcctgtggttactccca
ctcctcttgttcctcttgttactgctggcgcttctgctgctctgctgctggaaattctgt
gcctgctgcaaaacctgcttacagagctgccttgccctgctgccttgctgtaggaagtca
ccttatgttgtgttctctccaggtcgcatggttggcttcaaggaagatgagtatttgctc
cgccagtctctgctcaccacggaccacctagacacaccgatggtgaggactggcccaccc
aaaggaaccgatattgtccgctggaaggtcacagataatgtacaccgaggacccaatcac
ccccaggctatgataaaacccaaccctaaagagaccatccagttccccatctcgctccgg
ctaaacaagttgttctctgagaccctgtctcgccccgactccaaagacgccgaacagctc
cgcaaggaagtggccgataacctaaatgaggtgtacaagcagattcccggggcccagaag
gtgcaaaaaacctcattcagaatgcagagaaatgctggaaaaaggcaggacttcaccatc
atggacaccgtcttgtctgctcctcgcggaagctaccctgatattgtcagactgactgag
aaaaatgtccagtctggaaacatcaatgacctcaaagtagtgcccggctactacactgtg
gccacagacagagaggctgtgggagcaatagagttccaagaaggcgtggagtcggtagac
gttcatgtgccactttttgtcaaggatgaagatgatgacaagaagtcgctgcaggtggag
gccacggatgtgccactaggcattgctgagattgggaaacgtttggtcaacatcaccatc
atcaaagagcatgccaccagtgtcttctcgttcctccagccggcctacacctacagcagg
caggacggggtggccaacatcccaatcagcagagagatcatagaagatggacgcacacag
gtcacctatcgtacacgggacctcacggccaaggataagaaggactatgtgacagtggaa
ggagacctgaactatggtcctggtgagacccagaaaatggtgcctgttcatctgctggag
ctgggtgagaaagatggcctcctggaagacaaaccggtcaagcagtttgtcatggatctc
agtaacccacggcagggcgccaagctgggacgctacccgagaactactgtcaccatagca
gaccaaccagagcccagtgtggtaatgttcaaaaggggcgcccagaacttcaccacatct
gacctaagctataacatccctgtggtccgcactcgcaacctggacagccccgtcacagtg
aaatggcgcaccaaagaggccctgcgctataagcagtccggcctgctgatgtttggtcct
ggagagacggagaacaacatagtgatcgagcgcccagtggagccagagaccttccaactg
gagctgtctgacccaagtagcaacgcaatgatcggagagaggaagacaaccattgtcaat
gtcattgatcataacgttgagagagacattgatcagaagcagcaacttggttacataaac
cagaaagcgctctcccctggtattcacctccccgccccaggaaaccctaaggcccgagca
actggccccagaagcatccgcctcaactgggacccaccgcctggtaaccccatggggtac
aaggtgaagtattggatctatggtgatccagaaaaagatgcccaggtcttagatgtgaag
actcctcaagctgagctgaccaacctgtacccctattgtgactatgagatgcgagtgtgc
ggctacaatgcagtgggagatggctacgatacagacatggttgcctgtcagacactggag
gatgtgcctggtgaacctggacgcttggcctttaacgtcatcagtccaactgtcactcag
gtcagctgggcggagcctgcagagaccaatggcaacattgtggcttatgaggttgtctac
acacccatcgatgatctaacaaccacaggccccgctaagaaggtaaagattgacaacccc
aagaagcgaatgctgttgattgagaacctccagaccgctcagacctacttgtaccaggtc
cgggccaagaacagcgtgggctggggccccttccgagatgccaccatcaacctggcatca
cagcctgccagacctttgtccattcccatcattccagatatccctattgtggatgcagag
gcaggagacgagtatgacagctacctgatgtacagcaatgaggtgatgaagtccccaaca
ggctccaagacacccagcgtctctggtgatgattacacggtgaatgggaagtgggaacag
aacttccttttcccggggggatcagggacacgcaacttgtcagcatcgtcctctcctatg
tccactctgagctcaaactacagaggagcaggcggctcctttaccacagaaacaaacacc
acacactacatgtccggacaaggaggctctcgtagacttgacatgatcggaggaggagga
gttcacacatcagaagtcatcatgaggaagcgctcagagaacaggggttacaccgatgaa
aacatccgggactctatcgtcattggagacgtgtcaagccaaatctcagacataagtggg
ctcggctacattgggatgcagagcagctctcagagccagttcagctacagcctgtctcag
ggttcgagggccaggacccagtcttcagacgtcaatgaagccctgtataatctggacagg
gtgctgcaggatgcacgagtttctccgggtattccagacacccccagcagactggtgttt
tctgctctgggtcccactgctctcaaagtcagctggcaggagccccactgtgagaaagac
atcctgggctactgtgttctctaccagctgctcaatggaggtgaggtgaagcgtattgac
gtgatgaacccagcagagaactctgtgatcatccaggacctgctgcccaaccactcctac
ctatttaaggtaatggctcagagccaggagggttggggtccagagagagagggggtcatc
accatcgagtccgctgtcgaccccaagagtcccctcagccccatgccaggctcaccattt
actctgagcactcccagtgccccgggccccctggtcttcaccgctctgagccctgattcc
ctgcagctcagctgggagaaacctcgtaaacccaacggagacatcctgggctatgtagtc
acctgtgaacagctgcatggtggaggagacgtgcgctccttccaggtgaacggcgacagc
gctgagaccagtctgaccgtcccaaacctgactgagaacgtcccctacaagtttaaagtt
caggctcgcaccacacagggcttcggtccggagagggagggaatcattaccattgagtct
caggatggaagcgctttgtctcattacaacagccagtcaatggtgaggagggaagttttc
cagatgccaacagatgtcagcacacgaaccaacatctcccacaccatgatcaatgacccc
tacttctcagatgggatgatgatgaccacacagcacacagagaccagcggcctggtgacc
cgtcaaatcaccaaggaagtggttcagcggagcgtcgtaggaggagccaccgtctcaaag
aagatgttttatacgtccaaataa
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integrated database retrieval system
