Micropterus salmoides (largemouth bass): 119915783
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Entry
119915783 CDS
T07309
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like isoform X1
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msam03016
]
119915783
Transfer RNA biogenesis [BR:
msam03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
119915783
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_14
TPR_1
TPR_17
TPR_19
TPR_16
TPR_11
TPR_CcmH_CycH
TPR_8
TPR_10
RMD1-3
CFAP70_TPR_C
TPR-S
ANAPC3
TPR_Slam
CFAP70_mid_TPR
TPR_Psidin_N
TPR_20
DUF6686
TPR_MalT
DUF1647
TPR_SusR
Motif
Other DBs
NCBI-GeneID:
119915783
NCBI-ProteinID:
XP_038591449
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MSSSLHSRLQKLQSRFTWDLKEEDMDLENLSIRLQEQIDLQLGQQSAVALSYSFLAYVRY
LQGRQQEAMSLLNQSEEKTRECYGEESERRLIVTYGDQAWLKYHTGDYKQSHSYCQRVDD
ILVKYPAGSTTVLHPEVYGEKAWTYFTFAKSYYPKAIDCFCKALELQPDDSEWNAGYAIA
LYRTEPSDLETSQEDEESPAIKQLRRALEINPDDGVLLSMLALKLTAHKKHQEAEALVER
ALEKDPDNPHAMRYIARYLRDQGEDQRSIDLLKQALERTNQSAFIHHQLAMCYKKKQQAS
KNSKPFNKQEVKQWKDLRIQHLEEAVKIKPSFVLAIADLALLHGEEKNFSRAEELFQQGL
QNFSKTDKMICQVFHLNYANFQLYHTKQEAKAIPHYIKGLHLTPNTWEWKQCVMRLKMIA
ERRLSVDENDAQSYGLLGLVAKAEGDKKKAEDFYEKALD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctctcttcactccagactgcagaagctgcagagtcgcttcacctgggatctg
aaggaggaggacatggacctggaaaacctcagcattcgactacaggaacagatagacctt
cagctgggacagcagagtgcagtggctttgtcctacagcttcttggcttatgtcaggtat
cttcagggtcgacaacaggaggcgatgtcacttctcaaccaatcagaggagaagaccagg
gagtgttacggtgaggagagtgagcggcggctcatcgtgacgtacggagaccaggcctgg
ctgaaataccacacaggagactacaaacagtcacatagttactgccagagggtggacgac
atcctggtgaagtatcctgctggttctaccacagttctccacccagaggtatatggagaa
aaagcttggacctactttacgtttgctaaatcttactaccccaaagctattgactgtttc
tgtaaagcgttagagctgcagcctgatgacagcgagtggaacgctggctacgctattgcc
ctctaccgcacagaaccgagtgatttagaaacatcccaggaagatgaggagtcaccggcc
atcaaacagcttcggcgagccctggagatcaaccctgatgatggtgttctgctgtcgatg
ctggctctgaagctgaccgcccacaagaagcaccaagaggctgaagccctggtagagaga
gcactggagaaggatcctgacaaccctcatgcaatgcgctacatagccagatatcttcgt
gatcagggggaggatcagcggtccattgatctgctgaagcaagcgctggagaggaccaac
cagtcggctttcatccaccaccagctggctatgtgctacaagaaaaagcagcaagcaagc
aagaacagcaagcccttcaacaaacaagaggtgaagcagtggaaggatctgcgtattcaa
cacctggaagaagctgttaagataaagccttcatttgtccttgcaattgctgatctggca
ctgctgcacggagaggaaaagaatttcagcagggctgaggagctgttccaacagggattg
cagaatttttcaaagacagacaaaatgatttgtcaagttttccatctgaactatgcaaac
tttcagctctatcacaccaaacaggaagctaaagcgatccctcactacatcaagggtctg
catttaacaccgaacacatgggagtggaaacagtgtgtgatgaggctgaagatgatcgca
gagcggcgcctctcagtcgatgagaacgacgcccagtcttacggtctgttgggtctggtg
gccaaagctgagggcgacaagaagaaagctgaggacttctatgagaaagctctggactag
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