Micropterus salmoides (largemouth bass): 119915927
Help
Entry
119915927 CDS
T07309
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04145
Phagosome
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
msam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119915927
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119915927
09144 Cellular community - eukaryotes
04510 Focal adhesion
119915927
09142 Cell motility
04820 Cytoskeleton in muscle cells
119915927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119915927
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119915927
00536 Glycosaminoglycan binding proteins [BR:
msam00536
]
119915927
Membrane trafficking [BR:
msam04131
]
Endocytosis
Phagocytosis
Opsonins
119915927
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119915927
Exosomal proteins of colorectal cancer cells
119915927
Exosomal proteins of bladder cancer cells
119915927
Glycosaminoglycan binding proteins [BR:
msam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119915927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
119915927
NCBI-ProteinID:
XP_038591648
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MSPLRGFPWLLIFFCAAAVCAGVGGAKVDNVSSEICRHPCEDLVGLLTEIQGLRIVTSNL
LEDLERVSRENEEMRISLAELSNSNSNSNSNSNSNSNSNSNSSSSSRGRGRGRGDGRGDG
RGDGRGDDRGDDRSDGRGHGRGNGQGHGRGNGRGHGRGHGRSDGRGDRRGDGRGDGRGDG
RGDGRADGSGDGSGDGRGDGHGDGRADGSGDGSGDGSGDGRGDGHGDGRADGSGDGRGDG
HGDGRGDGHGDVNDLDRDRDGEIWCVQDGRVYEQGENWEVDSCTSCTCQDGKVVCQQVSC
PPVSCINPSFIDGTCCPVCQNNEDGWSPWSEWTYCSVTCGRGGQQRGRSCNGIMPSCAGP
SVQTRSCMPMKCDRKARADGNWGLWSPWSACTTTCGEGNITRVRLCNNPPPQKGGRGCTG
SARETSPCNNTLCPIAGGWTSWTEWSLCSESCGGGLMSRQRDCLNPAPQNGGKPCAGDAV
DYEGCNKQPCPIDICLISNPCFPGVDCTSHSDGSWECGRCPLGLNGNGTHCEDENECEVE
GMCVTECVNTDPGFYCLPCPHRYKGTQPYGLGLQEAQTTRQVCEPYNPCKDNTHTCHKYA
ECVYLGLASEVLYKCVCAVGFAGDGFLCGEDSDLDGWPNNRLTCKQNATYHCQKDNCPML
PNSGQEDLDNDGQGDACDPDDDNDDIIDERDNCPLVYNPRQFDSDRDGVGDRCDNCPFDS
NPLQTDTDDNGEGDACSIDIDGDEVLNDRDNCPLVYNTDQRDTDLDGVGDQCDNCPLLHN
PLQLDSDSDLVGDMCDNNEDIDEDGHQNSLDNCPYIANSNQADHDKDGKGDACDHDDDND
GIPDDRDNCRLVPNRDQLDSDGDGSGDACFDDFDNDSIPDALDPCPLNQDIGSTDFRKFQ
VVLLDPKGTTQSDPLWVIRSQGTELLQTANSDPGIALGYDKFSSVDFSVTFYVNTNRDDD
YAGIVFAYQSSRRFYVVMWKQVSQAYWEKMPSKAFGTAGVSIKLVNSTTGPGEYLRNALW
HTGNTRHQVRTLWHDPNKIGWKDFTAYRMHLIHRPKTGFIRMVVYEGRDILSDSGAVYDH
TLAGGRLGLFVFSQEHVLFSDLRYECRDN
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgctgagaggtttcccctggcttttgatattcttctgtgcggcagctgtgtgt
gcaggtgtgggtggtgcaaaagttgacaatgtgtcatcagaaatctgtcgtcatccgtgc
gaggacctggtgggcttgctcactgagatccaaggcctgcgtattgtgaccagcaacctg
cttgaggacctggagagagtatcaagagaaaatgaagagatgcgcatatctttggctgag
ctgagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagc
aacagcagcagcagcagcagaggccgtggccgtggccgtggtgatggccgtggtgatggc
cgtggcgatggccgtggcgatgatcgtggcgatgaccggagtgatggtcgtggccatggt
cgtggcaatggtcagggccatggtcgtggcaatggtcggggccatggtcgtggccatggt
cgtagcgatggtcgtggcgatcgccggggcgatggtcgtggtgatggccgtggcgatggt
cgaggtgatggccgtgccgatggcagcggtgatggcagcggtgatggccgtggcgatggt
catggtgatggccgtgccgatggcagcggtgatggcagcggtgatggcagcggtgatggc
cgtggcgatggtcatggtgatggccgtgccgatggcagcggtgatggccgtggcgatggt
catggtgatggccgtggcgatggtcatggtgatgtcaatgatcttgacagagatcgagac
ggggagatctggtgtgtgcaggatggacgagtgtatgagcaaggggagaattgggaggtg
gacagctgcacctcctgtacttgccaggatggaaaggtggtgtgtcagcaggtgtcttgc
cctcctgtatcctgcatcaatccatcttttatcgatggaacgtgctgtcctgtctgtcaa
aataatgaagatggctggtctccgtggtccgagtggacctactgttctgtaacctgtgga
cgcggagggcaacaaaggggccgatcctgcaatggcatcatgccatcctgtgcaggcccg
tcagtccaaacccgcagctgcatgccgatgaagtgtgaccgcaaggcgcgtgctgacggg
aactggggcctttggtctccctggtctgcctgtacaaccacatgtggagaaggcaatatc
acacgggtacgtctctgcaacaaccctccaccacagaaggggggcagagggtgtacgggc
agcgccagggagacatcaccttgcaacaatacactctgccccatcgctggaggctggaca
agctggactgagtggtcactgtgctcagagtcgtgtgggggaggtcttatgagtcgccag
cgggattgtttgaaccccgcccctcagaatggtgggaagccttgtgctggagatgctgtg
gactatgaaggatgtaacaaacaaccatgtcctatagatatatgtttgatctcaaatcca
tgttttcctggggtggactgcacatcacatagtgatggatcctgggagtgtggacgctgt
ccgttgggtttaaatggcaatggcactcactgtgaagatgagaacgagtgtgaagtggag
ggcatgtgtgtcactgagtgtgtaaacacagaccctggtttctactgtctgccctgtcct
catcgctataaaggaacccagccatatggccttggactgcaggaagcgcagacaaccaga
caggtttgtgaaccatacaatccttgcaaagacaacacacacacctgccacaagtatgct
gagtgtgtgtatctgggcctggcgtctgaggttttgtacaagtgtgtgtgcgctgtcggg
ttcgcgggcgatggatttctgtgtggtgaagactctgatctagatggctggcccaacaac
agattaacctgcaagcagaatgcaacctatcactgtcaaaaggacaattgccccatgcta
ccaaactctggacaggaagacctggacaatgacggacagggagatgcctgtgatcctgat
gatgacaatgatgacatcatagacgagagggacaactgcccgctggtttacaaccctagg
cagtttgactccgacagagatggggttggggaccgctgtgataactgtccatttgatagc
aacccgctgcagacagacacggatgacaatggagagggagacgcctgcagcatcgacatt
gatggagacgaggttctgaatgaccgtgacaactgtcccttggtctacaacactgaccag
agggacacagacttggatggtgttggagaccagtgtgacaactgtccccttcttcacaac
ccactgcagctagactctgacagtgacctggtgggggacatgtgcgacaacaacgaggac
attgatgaggatggccaccaaaactctctagacaactgtccctacattgccaatagcaac
caggctgaccatgacaaggacgggaagggagacgcctgtgaccatgacgacgacaacgac
ggtatccctgatgaccgggacaattgtagactagtgcccaacagggaccagttggactct
gatggtgatggtagtggagacgcatgctttgacgactttgacaatgacagtattccagat
gcgctggatccctgtccgctaaaccaggatattgggtccacagacttcaggaagtttcag
gttgttttgctggacccaaaaggcacaacacagtctgaccctctgtgggtgatccgcagc
caaggcaccgagctgctgcagacagccaactcggaccctggcatcgctttaggttatgac
aagttcagctcggtagacttcagtgtgacattttatgttaataccaaccgagatgacgac
tacgcaggcattgtgttcgcctaccagtccagtcgacgcttctatgttgtcatgtggaaa
caggtgtctcaggcctactgggagaaaatgccatccaaagcttttggcacggcaggagtc
tcaatcaaactggtcaactccaccacaggaccaggggagtatctacgtaatgccctgtgg
cacactggaaacaccagacaccaggtgagaactctgtggcacgaccccaataaaattggc
tggaaggacttcacagcctaccgcatgcacctcatccacagacccaagaccgggttcatc
aggatggtggtgtatgagggcagggacattttgtccgactcgggggcggtgtacgaccac
accctggctgggggcagactgggactgtttgtcttctctcaagaacacgtcctcttctca
gacctcagatatgagtgcagagataactga
DBGET
integrated database retrieval system
