Micropterus salmoides (largemouth bass): 119916032
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Entry
119916032 CDS
T07309
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
msam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119916032
03015 mRNA surveillance pathway
119916032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119916032
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119916032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
119916032
NCBI-ProteinID:
XP_038591798
LinkDB
All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MLTRASVWAPSPTKRKEDDKSKQRGKEKSGATKEGADKGRGRDKNRTRRNASSGSSRSSS
SSSSSSGSSSGSSSGSSSSASSHSGSSSSRSSSSSSSSSSPSPSRQRHNNRRRSRSKSKS
AKKDDRDRRRRSPTPKPTKVYLGRLTRNVIKEHIQEIFSTYGKIKMIDMPMNRVHPHLSK
GYAYVEFETPEEAEKALKHMDGGQIDGQEITVTAVLTPTVRPPPRRLSPPRRMPPPPPMW
RRTPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgctaacacgggcaagtgtttgggcgccttccccaacaaagaggaaggaggatgacaag
agtaaacagcgcggtaaggagaagtcaggagcaacgaaagaaggagctgacaaaggccgg
ggcagagacaaaaaccgcacccgacgcaatgcctccagtgggagcagcaggtccagctcc
agctccagcagcagctctggttccagctccggctcctccagtggctccagctcctctgcc
tccagccactctggctcatccagctcccgctcctcttcctcctcctcctcctcctcgtca
ccgagccccagccgccagcgccacaacaacagacgacgctcgcgctcaaagtcaaaatca
gcaaagaaggatgaccgggaccgacgacgtaggagccccacacccaaacccaccaaggtc
tacctgggccgactgaccagaaatgttatcaaggaacacatccaggagatcttctccacc
tatggcaagatcaagatgattgacatgcccatgaaccgtgtccaccctcacctgtccaaa
ggctacgcctacgtggagtttgagacacctgaggaggcagagaaggccctgaaacacatg
gacggaggtcagatcgacggtcaggagatcacagtcacagctgtgctgactcccacagtg
cgccctcccccccgccggctgtcccctccccgcaggatgcctcctccaccaccgatgtgg
cgacgcactccccctcgaatgaggagaaggtctcgctctccacggcgacgctctccagta
cgtcgcaggtctcgatcgcccggccgccgccgtcatcggtcgcgctctagttccaactcc
tcccgctag
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