Micropterus salmoides (largemouth bass): 119916037
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Entry
119916037 CDS
T07309
Symbol
nrxn1a
Name
(RefSeq) neurexin 1a isoform X1
KO
K07377
neurexin
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119916037 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119916037 (nrxn1a)
Membrane trafficking [BR:
msam04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
119916037 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Prokineticin
Motif
Other DBs
NCBI-GeneID:
119916037
NCBI-ProteinID:
XP_038591805
LinkDB
All DBs
Position
Unknown
AA seq
1484 aa
AA seq
DB search
MSVMAVCVWAAAPLLFLGLCLCSVGGQAQGEVLEFGGVSSQWGRFPVWNACCESVLSFSL
RTHSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAELQSGVAVSDGHWHAVRV
KRDWRNTSLEVDGRLEGWAEVKSKRRDMTVFSHTFMGGVTPELHSSPLRLTSPSVRDHPA
FRGWITAVGINGSLVTLDSSEGVTVTAGCGPDHQCQNGGVCSVVNDQAVCDCSDTGYQGN
DCSEEHSYTPGLAHLMIGDQAREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQR
NGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLR
QHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGC
LKEVVYKNNDVRLELSRLAKQGDPKMKVSGVVSFKCESVATLDPVTFDTPESFVALSKWT
AKKAGSISFDFRTTEPNGLMLFSHGKPRQQQRKDPRTPPTLKVDFFAIEMLDGHLYLLLD
MGSGTTKTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLDDTLYL
GGLPEDRAGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKPSCSRE
PPKQCLSNPCQHNGICREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQLPVAM
HTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTASKGP
ETIFAGSGLNDNEWHTVRVVRRGKSLKLTVDDLQPVEGQMAGDHTQLEFHNVETGIVTEK
RFMPAVPSNFIGHLQGLTLNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPVTFRSRSSF
VTLPTLQAYYSMHLFMQFKTTSPDGLILFNRGDGNDFIVVELVKGYLHYISDLGNGAHLI
KGNSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYIGGISKEM
YRELPKLVHSREGFQGCLATVDLNGRLPDLLADALATVGQVERGCEGPSTTCQEDSCSNQ
GVCLQQWEGFTCDCSMTSYAGPLCNDAGTTYIFGRDGGVVVYTWPPNERPSTRADRLALG
FSTQQKHAILLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEESSKFVNDGKYHII
RFTRSGGNATLQLDDLPVIERYPSGNIDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTI
FNSQTTVRVGGGERGTGMFQGQLSGLYYNGLRILNMAAEGHPHIRVEGSARLVGDMPSSS
ITPQSSAAAGGNRSDSAPSISDITTTTATNRKQGATQQSADDLLVASAECPSDDEDIDPC
DPSSARPPLPEVKVFPGPSEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGS
YHVDESRNYISNSATQPNGSTKDKPLGIAKISKNKKNKDKEYYV
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatggcggtgtgtgtttgggcggcagcccccctgctcttcctggggctgtgc
ctgtgcagcgtggggggtcaggcccaaggggaggtcttggagtttggaggtgtgtccagc
cagtgggggcggtttccagtgtggaacgcctgctgcgagagtgtgctgagcttcagtctg
cggactcacagccaagagggcctgctgctctacctggatgatgagggcttttgcgacttc
ctggagctgctgcttctccacggccaccttcgccttcggttctccatcttctgtgctgag
ccagccgagctgcagtcaggtgtggcggtgagtgatgggcactggcacgcagtgcgtgtc
aagcgggactggaggaacacctcgttggaggtggacgggcgactggagggatgggcggaa
gtgaagagcaagagaagagacatgacagtattcagccacacattcatgggtggggtgacg
ccagaactccactcctcgcccttgcgcctcacatccccttcggtgcgggatcaccccgcc
ttccgtggctggatcacggcggtgggcatcaatggctcactggtgactctggacagctca
gagggcgtcacagtaacagctggctgtgggccggatcaccagtgccagaacggaggtgtg
tgcagcgtggtcaacgaccaggccgtctgcgactgctccgacaccggttaccaaggcaat
gactgcagtgaagagcacagctacactccaggtctggcacacctgatgattggcgaccaa
gctcgcgaggagtatgttgccaccttcaagggctctgagtacttctgctatgacctgtcg
cccaaccccatccagtctagcagcgatgaaatcacactctccttcaagacactgcagcgc
aacggcctgatgctgcataccggcaagtcagccgactacgtcaacctggcgctgaagaac
ggtgccgtgtcacttgtcatcaacctcggctctggggccttcgaggccttggtggagccc
gtcaatggcaagttcaatgacaacgcctggcacgacgtcaaggtcacccgcaacctgaga
cagcactcaggcattggacacgctatggtgaccatctctgtggacggcatcctgaccacc
acgggctacacccaggaagactacaccatgctgggctctgacgacttcttctacgtggga
ggaagcccgagcaccgctgacctacctggttctccagtcagcaataacttcatgggctgt
ctcaaagaggtggtgtataagaacaatgatgtacgattggagctgtctagactggccaaa
cagggagacccaaagatgaaggtaagtggggtggtgtcctttaagtgtgagagtgtggcc
acactagaccccgtgacctttgacaccccagagtcttttgtggccctgagcaaatggaca
gcgaagaaggcgggatcgatctcgtttgacttcaggaccacagagccgaatgggttgatg
ctttttagccatggaaaacccagacagcagcaacgcaaggacccacgcacgcctcctaca
ctcaaggtggatttttttgccattgagatgctggatgggcacctgtacttgctgctggac
atgggctcaggaaccaccaagactaaggctatcgacagaaaagtcaatgacggagaatgg
tatcatgtggacttccaaagagacggacgctcaggaaccatctcggtgaatagtgtaaga
acagcgtacactgctccgggagacagtgagatcttggacctggatgacactttatacctt
ggaggactacctgaggaccgcgctggactcatcttccctacagaggtgtggacggctctg
ttgaactacggttacgtgggctgcatcagagacctgtttgtggacgggcagagcaaagac
atccggaggctggccgaggcccagagggctgtgggggtgaagccctcatgctccagagag
ccccccaaacagtgcctgtccaacccctgccagcacaacggcatctgcagggagggttgg
aatcgctacgtctgcgactgctctgggacaggataccttggacgctcctgtgagagagat
gcgactatcctgtcgtacgacggcagtaagtttatgaaggtgcagttgcctgtggcgatg
cacaccgaggcagaggacgtctcgctacgctttcgctcccagcgggcctatggcgttctc
atggcaaccacatcccgtaactctgcagacacccttcgtctggagctggatgggggccgt
gtccgactcactgtcaacctagactgtatcaggataaactgtacagccagtaaaggccca
gagaccatctttgcggggtcgggcctcaatgataatgagtggcacacagtgagggtagtc
cggcgtggcaagagcctgaaactcaccgtggatgacctgcagcctgttgaaggtcagatg
gcgggcgaccacacccagttggagttccacaatgtggagacgggtattgtgacggagaag
cgcttcatgcctgccgtgccctccaatttcattggccaccttcagggtctgacgctgaac
ggcatgccatacattgacctgtgcaagaacggcgacatcgactactgtgagctcaatgct
gttatcggctataagagcatcgtggctgaccctgtcacattccgctcacgctccagtttc
gtcacgctgcccacacttcaagcctactactccatgcatctcttcatgcaattcaagaca
acgtcccccgatggccttattctcttcaaccggggagatggcaatgacttcatagtggta
gagctggttaaaggctacctacactacatctctgatctgggcaatggagcacacctgatc
aagggcaactctaacagtcctctaaatgacaaccactggcacaatgtgcacatatcacga
gacacgaacaatcttcatacagtcaagattgacaccaaagtcaccactcagaccaccatg
ggcgccaagaacctcgacctaaagggtgatctgtacattgggggcatctccaaagagatg
tacagagaactgcccaagctggtccactcccgcgagggatttcagggttgcctagcaaca
gttgatctaaatggccggctccctgaccttttggctgatgccttggcaaccgtgggacaa
gtagagagaggctgtgaaggtcccagcacgacatgtcaagaagactcctgctcaaatcag
ggtgtttgtttgcagcagtgggagggcttcacctgtgactgcagcatgacttcgtatgct
gggccactgtgcaatgatgctgggaccacttatatctttggccgtgacggaggcgtggtg
gtttacacgtggccccctaatgaacgtcccagcaccagggcagaccggcttgcccttggg
ttcagcacccaacagaaacacgccattctgcttcgggtggacagcgcatctggcctggga
gactaccttcagctgcagatagacaaaggcaacattagagtagtgtttaatgttggcact
gatgacatcaacatcgaggagagctccaagtttgtcaacgatgggaagtaccacataatt
cgattcacccgcagcggaggcaatgcaaccctccaactggacgacctgccggtcatagag
cgctatccctcaggcaacattgataacgagcgcctggccatcgccagacagcgaatcccc
tatcggctcggtcgagtagttgacgaatggctactcgacaaaggtcggcagctgaccatc
ttcaacagccagacgaccgtgcgtgtaggtggaggtgagcgaggtacaggtatgttccaa
ggccagttgtctggcctctactacaacggcctccgcatcctcaacatggccgcagagggg
cacccgcacatcagagtggaaggcagcgcgcgactggtcggcgacatgccatcctcctcc
atcaccccgcagtctagcgctgcagctggaggcaaccgttctgactccgccccatcaata
agtgacatcacaaccaccacggccaccaacaggaaacagggtgccacacagcagtcggca
gacgacctgctggtggcttctgctgagtgtcccagcgatgatgaagacattgacccctgt
gaccccagttcagcccgtcctcccttacccgaggtgaaggtgttcccaggtccatctgag
gtggtgcgcgagagcagcagcaccacgggcatggtggtgggcatcgtggcagccgcagcc
ctctgcatcctcatcctcctctacgccatgtacaagtaccgcaaccgcgacgagggctcc
taccacgtggacgagagccgcaactacatcagcaactcagccacacagcccaacggcagc
accaaggacaagccgctgggcattgccaagatctccaagaacaagaagaacaaagacaag
gagtactacgtctga
DBGET
integrated database retrieval system