KEGG   Micropterus salmoides (largemouth bass): 119916209
Entry
119916209         CDS       T07309                                 
Name
(RefSeq) TATA-box-binding protein-like
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    119916209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:msam03000]
    119916209
   03021 Transcription machinery [BR:msam03021]
    119916209
Transcription factors [BR:msam03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    119916209
Transcription machinery [BR:msam03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     119916209
  RNA polymerase III system
    TFIIIB
     119916209
  RNA polymerase I system
    SL1/TIF-1B
     119916209
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 119916209
NCBI-ProteinID: XP_038592068
LinkDB
Position
Unknown
AA seq 274 aa
MDKSPLECYFDNFIANESVMTEKEEVKEELGDKPFLSVLTPYKPSQDDTDKRTGLDYSSQ
NSTAAAELPGGSSVPELGASPVCPVTPVMPVTQEPETIPQIQNILSTVTLGCCLDLDFIA
SKAWNVEYKPKTHKALTMRIRKPRTTAIIYETGNIVCTGAKSEEQSWLAARKFARIVQKL
GFPVGFFNFKIHNVVATWKTFPISLERLAHYQPCSYEPELFPGLYLYVVPGMTAIVFPSG
KIILSGAKNNAEVYKAFETLQPILSSFRRFRRQR
NT seq 825 nt   +upstreamnt  +downstreamnt
atggacaagtccccgttggagtgctactttgataacttcattgcaaacgaatctgtaatg
acggagaaggaggaggtgaaggaagagctgggcgataaaccattcctcagcgtactgacg
ccgtacaagcccagccaggacgacacagacaaacgcaccggtctggactacagctcccag
aattccacagcagcggccgagctcccgggtgggtcgtccgtgccggagctgggtgcctct
cctgtttgtcccgtgacccccgtgatgcctgtgacacaggaaccagaaaccatcccacag
atacagaacatcctctctacagtgacgctgggctgttgtctggacctggacttcattgct
tccaaggcctggaacgtagagtacaaaccaaagacacacaaggcgctcaccatgaggatc
cggaaaccgcgaacgacagcaattatctacgaaactggaaatattgtctgtacaggagcc
aagagtgaggagcagtcatggctggcggccaggaagttcgcccgcatagtgcagaagctg
ggcttccccgtcggcttcttcaactttaagattcacaacgtggtggccacttggaagacc
ttcccgatcagtttggagagactggcccactatcagccctgcagttacgaaccagagctg
tttcccggcctctacctctacgtggtgcctggcatgactgcaatcgtctttccatctggg
aagattattctaagcggagctaaaaataacgctgaggtctacaaagcatttgaaaccctc
caaccaatcctgagcagcttcaggagattcaggaggcagcgatga

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