Micropterus salmoides (largemouth bass): 119916257
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Entry
119916257 CDS
T07309
Symbol
si:ch211-141o9.10
Name
(RefSeq) probable endonuclease 4
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119916257 (si:ch211-141o9.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msam03400
]
119916257 (si:ch211-141o9.10)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119916257 (si:ch211-141o9.10)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119916257 (si:ch211-141o9.10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
119916257
NCBI-ProteinID:
XP_038592131
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MGPRKRGAKKRKTEEAFGGEKEGEHTEEEEAEGRGDRRRKDPANKKYIGAHVGIQGGIWK
AVESSTEMGGSSFALFLGSQRSWKRPALDQTAAAKFREQCFLQEFDPAHILPHGSYLMNC
GSPKEDVFEKSQALLVDELSRCSLLGLNLYNFHPGSSLGSITTEQCVDKIAGSINHAHQQ
TPAVVTVLENMSGQGSTVGGKFSELKSIIDKVRDQTRVGVCLDTCHAFAAGHDLAAEGGV
KAMLDEFDQEVGLHYLKAIHLNDSKGKLGCNLDRHEDIGKGHIGISAFRDIVNEPRLDNI
PLILETPGRPGFEYAEQIELLYSLCEKK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgagaaagagaggagcaaagaaaaggaaaaccgaggaggcttttggaggagaa
aaggagggtgaacacactgaggaggaggaggctgaagggagaggagacaggaggagaaag
gaccctgctaataagaaatacattggagctcatgttggcatccaaggtgggatatggaaa
gcagtggagtcctccacagagatgggtggcagcagttttgccctgtttctgggctcacag
cggtcatggaagaggcctgcactggaccagacagctgcagccaagtttcgggagcaatgt
ttcctacaagagttcgacccagctcacatcctgcctcatgggtcctacctgatgaactgt
ggatctcctaaagaggacgtgtttgagaagagccaggccctgctcgtggatgagctcagc
cgctgcagcctcctgggcctcaacctttacaacttccacccaggctcctctctaggctcc
atcaccactgagcagtgtgtggacaagatagcaggatccattaaccacgctcaccagcaa
acacctgctgtggttacagttttggagaacatgagtggtcagggcagtacggtgggcggt
aaattctcagagctgaagagcattatagacaaagtgagagaccagaccagagtaggagtg
tgtctagatacctgccacgccttcgcagcaggacatgacctggctgcagagggaggagtg
aaggccatgcttgatgagtttgatcaggaagtagggctccactatcttaaagccatccat
ctcaatgactccaaaggtaaactaggctgcaaccttgatcgccatgaagacataggtaaa
ggtcacattggaatctctgctttccgagatattgtcaatgagcccagactggacaacatc
cctctgatactggagacacctggacggccaggatttgagtatgctgagcagattgaactc
ctctattctctctgtgagaaaaagtaa
DBGET
integrated database retrieval system
