Micropterus salmoides (largemouth bass): 119916277
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Entry
119916277 CDS
T07309
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119916277 (rnf40)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119916277 (rnf40)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
119916277 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
OVT1
SpoIIE
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
119916277
NCBI-ProteinID:
XP_038592168
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MSGTGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQTMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEESVHILRKRIEPEAPM
TSTPAPPSAPLPDPTPMEEDGVSRASPTSAVPPPPLPEAQNEGEQAELQEERQEERQEDQ
QQPPPPTGSEELLMPKEPPQDSATDESPPPPPLSENAKGFIATLEHSSEEELTLHLQDRM
QFSKEAIACLVCVFDRLHSRIDDMCKQVEAAACEDDSQSDIVNENRALLEKNSRLRDLAT
LLQGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDMEKLRNREQKLNKHLAEAME
QLKSGYSSTGSSGGLPGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQVELQEAVR
ESEKLKMDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHLR
QIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRH
LISSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTGVLILEETTSDSIDVKKEED
EDQEEEEERRKELERQRAREREREAERERERERERERQRSDELKRKDSDTLKLLRVELKK
AQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVCSLVDELRMRVRELEERERKE
SKKLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQ
QLREKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEGV
LQSTLAALEKELSVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTA
RERESSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDKE
TVLTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtactgggggaggaaaacgtccctcaggaggggacagcccccctggcccacct
gagaagaagagcaaaaaagaggagaagaccaccaccactctcattgagcccatacggata
gctggagtctcctctacggaggaaatggacatgaaggttctccagttcaagaataaaaag
ctatgtgagcgcttggagcagaggcagacgatggaggatgagttaagagagaaaattgag
aagctagagaagagacaagccaccgatgacactaccctgctgattgtcaaccgatactgg
tcacagttggaagagagtgtgcacattctgcgcaagcgtattgagccagaagcgcccatg
acatctacccctgccccaccctcggcccctctccctgaccccacaccaatggaagaagat
ggtgtcagtcgggcctcaccaacttctgccgtgcctccacctccactcccagaggcccag
aatgagggggagcaggcagagctgcaggaggagcgtcaggaagagcgtcaggaggaccag
cagcagcccccacctcccactgggtcagaagagttgttgatgcccaaagagccaccacag
gactcagcaacagatgagtcaccgccccctcctcccctaagtgagaatgccaagggtttc
atagccacgctggagcacagcagcgaggaggaactaaccctgcacctccaggaccgcatg
caattcagcaaggaagccatcgcctgcttggtctgcgtttttgacaggctgcacagtcgc
atcgacgacatgtgcaagcaggttgaggctgcagcttgtgaggacgatagccagtctgac
atagtcaatgaaaaccgtgctctgctggagaagaatagtcgactgcgagacctggccact
ctcctgcaaggccgacaccacaagatgtctatggagtacaacgagttagtggacaaggtc
accagctccgagaccaaggtgtctgagatggagacgacggtggaggacctgcagtgggac
atggaaaaactccgcaatagggaacagaagcttaacaaacacctggcagaggccatggag
cagctaaagtctggatacagcagcaccggcagctcaggtggactacctggaggccaaatt
acattgaacattcagaagtttgagagtctcaatgcagagttggagcacaaccaggagttg
gctaatagccgcatggcagagttggagaaactgcaggtggagctccaggaggctgtgagg
gaaagcgagaagctcaagatggacttgcggaatattcccgaagaggttgtgaaggagacc
ctagagtacaaatgtctgcagtcccagttctccctgctgtacaatgagtctcttggtgtg
aaaacccagctggatgaggcacgagcccttctgctcactgccaagaacgcccatctccga
cagattgagcacatggagagtgatgagctgtcccttcagaagaagctgcggactgaggtc
atccagctggaggacaccctggcccaagtgcgcaaagagtatgagatgctgcgtattgag
tttgagcagaatctggcagccaacgagcaagcaggaccaatcaacagagagatgcgacac
ttaatcagtagccttcagaaccacaacctgcagttgaaaggtgatgtgcagcgctataag
aggaagctgcgggaaacccagatggagatcaataaattgcgttgtcagagtggtgacact
ggggttctgattcttgaggagacgactagtgacagcattgatgtgaagaaagaagaggat
gaggatcaggaggaggaggaggagaggaggaaggaactggagagacagcgggctcgagag
agggagagggaggctgagcgagagcgagagagggaacgtgagagagagaggcagcgcagc
gacgagctgaagaggaaggactcggacaccctgaagctgctcagagtagaactaaagaaa
gcccaggagtcccagaaagagatgaagctcttgctggacatgtataagtcggctccaaag
gagcagagggacaaagtacagcttatggcagccgaacgcaaatctaaagctgaggtttgt
tctttggtggatgagttgaggatgcgagtgcgagagctggaggagagggagaggaaggaa
agcaagaagctggctgatgaagatgccctcaggaagatccgagtggctgaagagaccatt
gagcatctgcagaagaaacttgctgccactaagcaggaggaggaagccctgctgagcgag
atggatgtaaccggccaggccttcgaggacatgcaggagcagaacagccggctgttgcag
cagctacgggagaaggacgatgccaatttcaagctgatgagtgagcgaatcaaatctaac
cagatctacaagctgctgaaggaggagaaggaggagttggctgaccaagtcctcacattc
aaaacccaggtggatgcccagctgctggttgtgcagaagttggaggaaaaagagggcgtc
cttcagagcacacttgccgctctggaaaaagagctgtctgtacggacacaagctctagaa
ctcaacaagaggaaggcagtggaggctgcccagctggcagaggacctgaaggtgcagctg
gagcacacgcaggccaagctcaaggagattcaggtctctgtggctgagaaccgcaccgcc
cgggagagggagagcagcaacctgaaacgagcacaggaggatctatccaggctgagacga
aagctggagaaacagaagaaggtggaggtgtactctgatgctgatgagatcctgcaggag
gagatcaaccagtacaaggccaagctgcgctgtccctgctgcaacacacgggacaaggag
acggtgctcaccaagtgtttccacgtattctgttacgaatgtctgaagatgcgttacgac
acccgacagaggaagtgccccaagtgcaactgtgccttcggagccaacgactttcaccgc
atctacatcacctaa
DBGET
integrated database retrieval system
