Micropterus salmoides (largemouth bass): 119916324
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Entry
119916324 CDS
T07309
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04514
Cell adhesion molecule (CAM) interaction
msam04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119916324
04517 IgSF CAM signaling
119916324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119916324
Cell adhesion molecules [BR:
msam04515
]
Immunoglobulin superfamily
NGL family
119916324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_14
LRR_9
V-set
Ig_2
LRRNT
LRR_EndoS
LRR_LRWD1
Ig_6
DUF7617
Motif
Other DBs
NCBI-GeneID:
119916324
NCBI-ProteinID:
XP_038592230
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MRVVMVTSPCTPSPLLWLVQLLLWLHNHGPQLTEAAPPCPTLCTCSNQASRVICTRKSLD
QVPDSISENTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFIGLPNLNT
LELFDNRLTVVPSQAFEYLSKLKELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVETVETVRGDEKNSARQYINETFIDFPNP
TVQRGVLEGRPGITISPSLSSLSSLSPRANRATENAVTVSIMDVTNIPGLDDVMKTTKII
IGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTL
NSGSGGEGTLRIHHPEIVNLPNIGRTDTLNHYYKTHHFNNNVMGLSIGTDGMGPGGILNN
KNQQCQDIPISCTSVPISTSNLLSTSGNGTNINPSSMSPPLPMSLPMPTMGLHGSIKGFM
GQNQNPQMEPLLFKGSSKENVQETQI
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgtaccccttcccccctcctctggctggtccaa
cttttgttgtggttacacaaccatggacctcagctgacagaggcagcacccccctgcccc
accctgtgtacctgctccaatcaggcgagccgtgtcatctgtacaaggaagagtttagat
caagtcccagacagtatttcagagaacacaagatacctcaatctacaagagaacacaatt
caggtgatcaagtctgacacatttaagcacctgcggcatttggaaatcctccagctctcc
aagaaccacatccggcaaattgaggtgggagcttttattggccttcccaacctcaacaca
ctggagctttttgacaaccgtctcacagtggtgccgtcacaagcctttgagtacctcagc
aagctaaaggaactatggctacgaaacaaccccatcgagacactgccggcatttgccttt
caccgtgttccctctttacgccgtctcgatctaggggaactcaggaagctggatttcatc
tcagaggctgcctttgaaggtctggtcaacttgcgcttcttgaatcttggcatgtgtggc
ttgaaggacatccctaacctcaccccactagttcgactagaggagttggagctgtcagga
aaccagctcgggatagtcaggcctgggtccttccagggcctagtgtcacttcgcaagctg
tggctaatgcactccagagtgtcagtcatcgaacgcaatgcttttgatgacctcaaaaac
ttggaggagctcaacctttcccacaattccctgcattccctgccccatgacctcttcacc
cctttgcaccagttggagagggtgcatctcaaccacaacccctgggtgtgcaactgtgat
gtcctttggctcagctggtggctgaaagaaacagttcccagcaacaccacatgttgtgct
cgctgccatgcgcccccaggtctaaagggaaagtacattggggaactagaccagagccac
tttacctgctatgcccccgtgattgttgagccacccactgacctcaatgtcactgaaggc
atggctgctgagctgaaatgtcgtacaggaacctcgatgacctctgtaaattggttcact
ccaaatgggactctgatgacccacggatcataccgagttaggatctcagtgcttcatgac
ggaacactgaacttcacaaatgtgaccgtgcaagacactgggcaatacacttgcatggta
accaactctgctggaaacaccactgcaaccgccgtgctcaatgtgtctgcttcagacccc
agcaacagctacagctatttcaccactgtcactgtagaaacagtagagacagtaagagga
gatgagaagaactcagcgagacagtatattaacgagaccttcatagattttcccaatcct
actgttcaaagaggggtgttagagggccgacctggcatcaccatatcaccttctctctct
tctctttcctcactgtccccacgtgccaacagagctactgaaaatgcagtgactgtgtcc
ataatggatgtaactaacattccaggcctggatgatgtaatgaaaacaactaaaatcatc
attggttgctttgtggccattacctttatggcagctgtaatgttggtggtattctataaa
ctacggaagcagcaccagctacacaagcaccacggccctgccagagccattgaaattgtc
aatgttgaagatgagattggagccggggctgggagtggcatctcaggtggttcgacactg
aattctggcagtggtggagaaggaaccctaagaatacatcatccagaaatagtcaacctt
cccaacattggccgcacagacactctcaaccattactacaagactcatcatttcaacaac
aacgttatgggtcttagtattggcacagacgggatgggaccaggagggatcctcaataac
aagaaccagcaatgccaggatatccccatctcctgtacctctgtcccaatctctacatct
aatttgctctctacttcaggcaatggcaccaacatcaaccccagttctatgtcgccaccg
ctgccgatgtctctccccatgcctaccatgggcttacatggatcgatcaagggtttcatg
ggccaaaaccagaatccgcaaatggagcctcttctcttcaagggaagctcgaaggaaaat
gtccaagagactcagatttaa
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