KEGG   Micropterus salmoides (largemouth bass): 119916342
Entry
119916342         CDS       T07309                                 
Symbol
wdr24
Name
(RefSeq) GATOR complex protein WDR24
  KO
K20408  SEA/GATOR complex protein SEA2/WDR24
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:msam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    119916342 (wdr24)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msam04131]
    119916342 (wdr24)
Membrane trafficking [BR:msam04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    119916342 (wdr24)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd MIOS_WD40 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_IFT140_1st zf-RING_16 Beta-prop_NUP159_NUP214 BBS2_Mid
Other DBs
NCBI-GeneID: 119916342
NCBI-ProteinID: XP_038592253
LinkDB
Position
Unknown
AA seq 788 aa
MEKMSRVTTALSSSAVSGRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYVLEEEQFV
EKLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEVNMLLSGSQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFA
ASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTN
RAKEIYCVQTIASVARVKWRPERKFHLATCSMMVDHNIYVWDVRRPFIPFATFEEHKDVT
TGIVWRHQHDPHFLLSGSKDSTLYQHMFKDATRPVDKANPEGLCFGLFGDLAFAAKESLI
SSDANRKPYPGGDRRYPIFFFKKPDPTEQFAHVSSALSVFETDLDSNRMDWFVKTAQLYL
LSGKPFAELCDHNAKVARELKRPQVSTTWTMLRIMFSDPANLMPGPNHNLSKLGTLPLMN
SFSMKEMGSGMGTESRLERSKGESRQDNIHLEPGNTHIGNNNEENEETEGSEGQAEYMFG
DAELDDDDLYSMEHDNQTEEQEYTLPQEAFQLRHEIMDNPSAPEHLQQDKADSPHVSGNE
AEITCLTPIESFSLISISQPLFSPHLPASFFCPIVREMLSYYAEQGDVQMAVSVLIVLGD
RIRKEIDDLTQEHWYMSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQTSTTLHINCSNC
KRPMSNRGWICDRCHQCASVCAVCHHVVKGLFVWCQGCSHGGHLEHIMNWLKSSAHCPAG
CGHLCEYT
NT seq 2367 nt   +upstreamnt  +downstreamnt
atggagaagatgtcacgggttaccacagccctcagcagcagtgccgtcagtggtcgaact
atgttctgccacttggatgcgcctgccaacgccatcagcgtgtgccgtgacgccacgcag
gtggtggtagctggccgtaacatcttcaagatctatgtgctggaagaggagcaatttgtg
gagaagctaaatctacgtgtcggccgcaaaccctctctcaacttcagctgcgcagatgtt
atgtggcaccagatggaggagaacctgctggccacggctgccaccaatggggcggtggtt
acctggaacctgggaaagccctcccgtaacaagcaggaccagctgtttactgagcacaaa
cgcactgtcaacaaggtgtgcttccatcccacagaggttaacatgctgctaagtggctcg
caagatggcttcatgaagtgcttcgacctgcgcaagaaggagtcagtcagcactttctca
ggtcagtcagagagcgtaagggacgtccagttcagcatgaaggattatttcacatttgct
gcatcctttgagaatggcaacgtccagctgtgggacatcaggcggccggaccgctacgag
cgaatgttcaccgcccatactggccctgtgttctgctgcgactggcaccccgatgacaga
ggatggctggccactgggggaagggacaagatggtgaaagtgtgggacatgaccactaac
cgggccaaggagatctattgtgtccagacgatcgcctcagtggcgcgggtcaagtggcga
cctgagaggaagtttcatttagccacctgttccatgatggtggatcataacatctatgtg
tgggatgtccgcagacctttcattccctttgccaccttcgaggaacacaaggatgtgacc
actggtattgtgtggcgccaccagcacgaccctcattttctgctctctggctctaaggac
agcacactctaccaacacatgttcaaagacgccactcgccctgtggacaaggccaacccc
gagggtctgtgctttggactgtttggtgacttggcctttgcagccaaggagagtctcatt
agcagtgatgccaacagaaagccttaccctgggggtgaccgccgctaccccatctttttc
ttcaagaagcccgacccgacagaacagtttgcccacgtgtccagcgcccttagcgtcttt
gaaacagacctggacagtaaccgcatggactggtttgtcaagacagcacaactctacctc
ctcagtgggaagccgtttgctgagctgtgtgatcacaatgccaaggtggcccgggagctc
aaaagacctcaggtttccacaacatggaccatgttgagaatcatgttctctgacccagca
aacctcatgccaggtccaaaccacaacctcagtaaactgggcaccttacctctaatgaac
agtttcagcatgaaggaaatgggttcagggatgggcacagagagcagactggagcgtagt
aaaggtgagagcaggcaggacaacatccacttggagcctgggaacacacacatcggcaat
aataacgaagaaaatgaggagacagaaggcagtgagggccaggctgagtatatgttcggt
gatgccgagttagatgacgatgacctctactctatggagcatgacaaccaaacagaagag
caggagtacacgctgccccaggaggccttccagctacgccacgagatcatggataaccct
tctgccccagagcaccttcaacaggacaaggccgactccccgcatgtcagcggcaacgag
gctgaaatcacttgtctgacacccatcgagtccttctcactcatctccatttcccagcca
ctgttcagcccgcatctacctgccagcttcttctgtcccattgtgcgggagatgctgagc
tactacgccgagcagggcgacgtgcagatggccgtgtctgtgcttatcgtcttgggggac
cggatccgcaaagagattgatgacctcacccaggagcactggtacatgtcctacatagac
ctgctgcagcgatttgagttgtggaacgtgtccaatgaggtcatcaagttgagtacgtgc
agcgccatcacctgcctgaaccagacttctacaacactgcacatcaactgtagcaactgc
aagcggccaatgagcaacaggggctggatttgtgacaggtgccaccagtgtgccagcgtg
tgtgcagtgtgccaccatgtggtgaagggactgtttgtgtggtgtcagggctgcagccac
ggtggacatctggagcacataatgaactggctgaagagcagcgcccactgccctgctggc
tgcggtcacctgtgtgagtacacctga

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