Micropterus salmoides (largemouth bass): 119916373
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Entry
119916373 CDS
T07309
Symbol
epas1a
Name
(RefSeq) endothelial PAS domain-containing protein 1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04137
Mitophagy - animal
msam04140
Autophagy - animal
msam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119916373 (epas1a)
04137 Mitophagy - animal
119916373 (epas1a)
04148 Efferocytosis
119916373 (epas1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119916373 (epas1a)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
119916373 (epas1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
bHLH_HIF1A
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
119916373
NCBI-ProteinID:
XP_038592293
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MTADKEKRRAISREAARRRRRVESDVFGDLSRLLPLQPSVRTHLDKPSVIRLALSYIRIH
KVLKGNAGTKAEASHTVKHGQGMESGEERREYGGGRGEKEKETEDLEASEETDMYLRTLE
GFLMVLSTEGDMIFLSDNVCKYMGLTQTELMGHNIFEFTHPCDHEEIRNNLRLSAGEVWC
GGKRDFVMRIKSALTHRGRSANLKSATWKVLHCQGRAKVCVASSSVSCLLLTCQTLPLSH
TLLSTHTFTSQHSMDMRFTYCEQRVTLLLGYSPEELLGRSIYGLCHTLDTSCLTKNHLNL
CFKSQSVSGQYRMLVKGGGYVWVESHSAVIPSGRPSKSMPGAHQPLCILCVTYVLSGVEE
PFLQLSLDQTAHRYWS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgacaaggagaagagaagggcgatcagccgtgaggcagccagaaggagacga
cgggttgagtctgacgtgtttggagatttgtctcgtctcctgcctctccaaccctctgtc
cgaactcacctggacaagccctcagtcattcgcctcgccctcagctacatacgcatccac
aaagtgctcaaagggaacgctgggacaaaagcagaggccagtcacacagtaaaacatgga
caaggaatggaaagtggagaggagcggcgagagtatggcggaggacgtggtgagaaggag
aaagaaacagaggatctcgaagcctcagaggagacagacatgtacctaaggaccctggag
ggatttctgatggtcctgtccaccgagggagacatgatcttcctgtctgacaatgtctgc
aagtacatgggattgacacagactgagctgatgggacacaatatttttgagtttactcac
ccttgtgaccacgaagaaatcagaaataatctacgtctgtcagcaggggaagtttggtgc
ggtggaaagagggactttgtcatgaggataaaaagtgctctgacgcacagaggaaggagc
gccaacctcaagtcagctacgtggaaggtcctccactgtcagggccgagcgaaggtgtgt
gtcgcctcgtcttcagtgtcctgcctgctgttaacatgccagactctgcccctctcacac
acactcctcagcacacataccttcaccagccagcacagcatggacatgaggttcacatac
tgtgagcagagagtgactctacttttaggttacagccctgaggagctgcttggccgttcc
atctatggcctctgccacacactggacacaagctgtttgactaaaaatcatctgaacttg
tgctttaagagccagtctgtcagtggtcagtacaggatgctggtgaaaggtggaggttac
gtctgggtggagagtcacagtgctgtcatccccagcggccgaccctccaagtccatgccc
ggcgcccaccagccactctgcatcctctgtgttacctatgtcctcagtggagtggaggag
ccgttcctgcagctctccttggaccagactgcccacagatattggagctga
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