Micropterus salmoides (largemouth bass): 119916817 Help Entry 119916817         CDS       T07309                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism msam  Micropterus salmoides (largemouth bass) Pathway msam03430   Mismatch repair Brite KEGG Orthology (KO) [BR:msam00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     119916817 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:msam03400]     119916817 (msh6) DNA repair and recombination proteins [BR:msam03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      119916817 (msh6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II Motif Other DBs NCBI-GeneID:  119916817 NCBI-ProteinID:  XP_038592702 LinkDB All DBs Position Unknown AA seq 1381 aa AA seqDB search MAKQSSLFNFFTKSPPPVSKPKPSPSPAEADLPSSIEKSNSSPKEQAKQTPQQQPAKTNK VKPKSNSKPAKGGFNKLFGDKASTTKERSTCTLNAGALVWAKLEGHPWWPCMVVPQPLTG QQMRGRGRDQRIHVHFFDEPPTRGWVSTKYVREYQGSDSSDAKTGGVFFSGKPVIRHAME LADAVMFDSSDKRLKMPLCMDPSDDEEDEDEEMELDNSTVTDEEVSDEAEQKNKEVKSSK VSRRSSRASTEKGNKAKRRRIIVASDSDGSDEEFKPEHTASSSEDEEEEGTVSSEEEEAE STQESEAESPIKPVKRKRPAEKSVPTKAKMPITPSLAAPKRAPAAAVAADTKSRLSAFSA PDNFESQANGSGASGGATVWDHEKLEWLQDGRRKDSKRRRQTEDDYDPTTLYVPEDFLNR VTPGMRRWWQLKSNMFDTVIFYKVGKFYELYHMDAVVGVNELGLTFMKGAWAHSGFPEIG FARFSDVLVQKGYKVARVEQTETPEMMEARCKTMAKPTKFDRVVKREVCRIITRGTQTYS VLDGAPSESQSKFLLSLKEKAEEESSGCCRTYGVCFVDTSVGYFHIGQFPDDRHCSRLRT LMAHFAPAEVLFEKGNPSVETRKILKASLSSALQEGLNAGTQFWDAQKTLKTLSEEDYFK DSAGKDQGTGSNFLPALLKEMTSESDSLCLTPKDGYELALSALGGSIFYLKKCLVDKELL SMANFEEYVPVDVEMEKAAGTASFFAQTRQRMVLDGVTLANLEIFQNGSGGTEGTLLERL DTCSTPFGKRLLKQWLCAPLCNPTSIKDRLDAVEDLMGAQAQATEVSDLLKKLPDLERLL SKIHSIGTPLKGQDHPDTRAVLYEEVTYSKRKIADFLSALEGFKTMQEIISVLAPVSGEF QSTLLRQVVTLKSGLFPDLSAELRRWETAFDHQKARTTGVITPKAGFDPEYDQALIGVKN CERELQDYLDRQKKRLGCKNMSFWGTGRNRYQIEVPDSVSERNIPEEYEVKSTKKGWKRY VTKESERLFSELQGFEEKRDAALKDCMRRLFYNFDKNYRDWKTGVECMAVLDVLLALSRY SQGGDGPMTRPEVVLPECDDQVAPFLDLTGSRHPCVTKTFFGDDFIPNDIYIGCPGSGEN DEENNGHASCVLVTGPNMGGKSTLMRQCGLVIMLAQLGCYVPAESLRFTPVDRVFTRLGA SDRIMAGESTFFVELSETASILHHATKHSVVLLDELGRGTATYDGTAIASAVVKELAEKI CCRTLFSTHYHSLVEDYANNPTVRLGHMACMVENECEDPSQETITFLYKFISGACPKSYG FNAARLASLPEEVIQSGHMKAREFERSTISLRLFKKLCQFAEDATLGNTHFASLVQMLNT L NT seq 4146 nt NT seq  +upstreamnt  +downstreamnt atggcgaagcaaagctcccttttcaatttttttaccaagtccccgccgccggtctcgaag ccgaagccgagtccttctccggctgaggcagatctgccgtcctccatagagaagtccaac tcctctccgaaagagcaggctaaacagacaccgcaacaacaaccagccaagaccaacaaa gttaaaccgaaaagtaactccaagcctgcgaaggggggattcaacaagctctttggcgac aaggcctcaacaaccaaagaacgctccacatgcacattaaatgctggtgctcttgtgtgg gcaaagctggagggacacccctggtggccatgcatggtggtgccccaacctctgactgga cagcagatgagggggcgtggtcgggaccaacgcatacatgtccatttctttgatgaaccc cctactagaggatgggtcagcaccaaatatgtccgggagtaccaaggctctgacagcagt gatgctaaaacgggaggggtgttcttcagcgggaaacctgtaatccgtcatgcaatggag ctcgctgatgccgttatgtttgatagctctgataaaagattgaagatgcctctctgtatg gatccgtctgatgatgaagaggatgaagatgaagaaatggagcttgacaattcaacagtg actgatgaagaggtcagtgatgaggctgaacagaaaaataaggaagtgaagtcatccaag gtcagtcgacgttcatcccgtgcttcaacagaaaagggaaataaggccaagcgccgtcgc ataattgtcgcctcagacagtgatggatcagatgaggaattcaaaccagaacacactgca tccagcagtgaggatgaggaggaagaagggacagtgagcagtgaagaggaggaagcggag agcacacaagagtctgaagcagaaagccccatcaagcccgtaaagcgcaaacgtcccgca gaaaagtctgttcctacaaaggccaagatgcctattaccccgtctttggcagcaccaaaa cgagctccagcagctgctgttgcagctgacaccaagtctcgtttgtcagccttctctgcc cctgacaactttgagagccaggcaaacggatcaggcgccagtggaggcgccacagtttgg gaccacgagaagctggagtggttgcaggatggaaggaggaaagacagcaaaaggcggcga cagacggaagatgactacgatcctaccaccctgtatgtgccagaagactttctaaacaga gtgacacctggtatgcgtcggtggtggcagctcaaatccaatatgtttgatacagtgatt ttctacaaggtggggaagttctatgagctctaccacatggatgccgtggtcggtgtcaac gagctagggctaactttcatgaagggagcctgggcacactcaggctttccagagatcggc tttgcacgtttctcagatgtacttgtacagaaaggctacaaggtggctcgtgtggagcag acggagaccccagagatgatggaagcacgctgtaagaccatggccaagcccacaaagttt gaccgcgtagtgaaaagagaggtgtgccggatcatcacacgtggtacccaaacctacagt gtgttggatggagctccctctgagagtcagagcaagttcctgttgagtttgaaggaaaag gctgaagaggaaagctctgggtgttgccgcacatacggagtctgctttgtagatacctct gtgggttatttccacattggtcagtttccagacgaccgtcactgctcacgtctgcgcact ctgatggcacactttgcccctgctgaggtgctctttgaaaaggggaacccatccgttgaa acacgcaaaatactcaaggcctccctgtcctctgctttgcaggaaggacttaatgccggc actcagttctgggatgctcagaaaacacttaaaaccctttcagaagaagattactttaaa gacagtgctgggaaggatcaggggacagggagcaattttcttcctgctcttcttaaagag atgacctctgagagtgattctctgtgccttactcctaaagatggctatgaactggcactg tcagcactgggcggaagcattttctacctgaagaaatgtctggtagacaaagagctactc tccatggccaactttgaagaatatgtccctgttgatgttgagatggagaaagctgctgga actgccagtttctttgcccagactcgtcagcggatggttcttgatggagtgactctggca aacttggaaatctttcagaatggatcgggaggaacagaagggacgctgctggagcgtttg gacacctgctctaccccgtttggcaagaggctgctgaaacagtggctctgtgctcctctg tgtaaccccacatccatcaaggacagactggatgcagtagaagacctgatgggagctcag gcccaggccactgaggtttcagacctgctgaagaagctcccagatttagagcgtcttctg agtaaaatccacagcattggcactcctctaaaaggccaggatcaccctgacaccagagct gttctgtatgaggaggtcacctacagcaagcgcaagatagcagacttcctctcagcgctg gaaggtttcaaaactatgcaggagatcatttctgtcctcgctccagtttcaggcgaattc caatccacattgctccgtcaagttgtcactctgaaaagtgggctctttcctgatctgtcc gctgaactcaggcgctgggagacagccttcgaccaccagaaagcccgcactactggtgtc attacccctaaagctggctttgacccagagtatgaccaggctctgatcggagtcaagaac tgtgagcgagagctgcaggattacttggacaggcagaagaagagacttggctgtaaaaac atgtctttctggggaactgggcgaaaccgctaccagattgaggtgcctgacagcgtctca gagaggaatatccctgaggagtatgaggtgaaatctacaaagaaaggctggaagcgttat gtgacaaaggagagtgaacggctgttctcagagctgcaaggatttgaggagaagagagat gctgccctgaaagactgcatgaggaggcttttctacaactttgacaagaactacagagac tggaagactggtgtggagtgcatggcagtgcttgatgtgctgctagctttgtcacgctac agtcagggcggagacgggccgatgaccaggccagaggtggtgctccctgagtgcgacgac caggtagcgcccttccttgacctcactggatcccgccacccttgtgtcaccaagaccttt tttggggacgatttcatccctaatgacatctacattggctgccctggtagcggtgaaaat gatgaggaaaacaacggtcatgcttcttgtgtcctcgtcacagggccaaacatgggtgga aagtctactctcatgagacagtgcggacttgtgatcatgctagctcagctgggttgctat gttcctgccgagagcctacgtttcacaccggttgacagggttttcactcggctgggagcc tcggatcgtattatggctggagagagtaccttctttgtggagctaagtgagactgccagc atccttcaccatgccactaagcactcagttgtgctcctggatgaattaggaaggggcaca gccacatatgacggcacagcaattgccagtgctgtcgtgaaggagcttgctgagaagatc tgctgtcgcaccctcttctctacacattaccactccctggtggaggactatgccaacaac cctactgtgaggttgggccacatggcgtgcatggtggagaatgaatgtgaggatccaagt caagagaccatcacattcctctacaagttcatctccggtgcttgtccgaagagttacggc ttcaacgctgctcgactcgccagcctgccagaggaggttatccaatcaggacacatgaag gccagagagtttgagaggagcaccatcagcctcagactcttcaagaagctctgccagttt gctgaagatgccacactgggcaacacacacttcgcttcacttgttcagatgctgaacacc ctgtag

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