Micropterus salmoides (largemouth bass): 119916898
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Entry
119916898 CDS
T07309
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119916898 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119916898 (kcnma1a)
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
119916898 (kcnma1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
119916898
NCBI-ProteinID:
XP_038592788
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MLAEADGTVPHGSDSSMRTSNIINNKNPDSSILISKMEDVVIPFSSEVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYMWTVCCHCNIKTKEAQKVNNPANNQAADRPKGADEK
EEVPASEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQH
FYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSW
LGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPW
ENFQNSQSLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEII
ELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISP
NLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMR
VISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQGL
STMLANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTICELCYVKLKL
LLIAIEYKSEQRESRSRKRILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDI
TDPKRIKKCGCKRLEDEHPSTLSPKKKQRNGGMRNSPNCSPKMMSRHDPLLIPGNEQIES
MDMNVKRYDSTGMFHWCPSKDIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLV
MPLRASNFHYHELKPIVFVGSLDYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCD
MCVILSANQNNIEDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDS
SPVHGFVRQASVTTGSNIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVS
VLDSLMSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTLANRDRCRVA
QLALYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNAPSGCTKRYVITNPP
YEFELVPTDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPPSNRQNRSSKT
REARDKQNATRMNRMGQEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQYKSTSSLIPPI
REVEDEC
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgaggcagatggcaccgttccccatggaagcgacagctctatgaggacaagc
aatatcattaataacaaaaatccggactcttcaatcttaatatccaagatggaagacgtt
gtcatcccgttctcgtctgaggtgccctgcgacaataatggacagcgcatgtggtgggca
ttcctcgcctcctccatggtgacgttttttgggggtctcttcatcatcctgctgtggagg
accctcaaatatatgtggactgtttgctgccattgcaacatcaaaaccaaggaggctcag
aaggtgaacaaccccgccaacaatcaggcagcagacagaccaaagggtgctgatgagaag
gaggaggtcccagccagcgaagtgggatggatgacttcagtcaaagactgggctggtgtc
atgatctctgctcagacgctcactggcagagttctggtggtgttagtctttgcgctcagt
atcggggcccttggaatatactttatagactcctcagatcctatagaatcctgccagcac
ttctacaaagacttcacgttgcagatcgatatggccttcaacgtcttcttccttctttac
tttggcctgcggtttatagcagccaatgataagctgtggttctggctggaggtcaactca
gtggtcgacttcttcactgttcctcctgtgtttgtctctgtctacttgaacagaagctgg
cttggtttaagattcctcagagcactaagattgatacagttctcggaaatcttacagttc
ttgaatatcttgaaaacaagcaattccattaagctggtgaacctgtgttccatcttcata
agcacatggctcacagctgctgggttcatacatttggtagaaaactcaggggatccttgg
gaaaacttccagaattcccagtcactttcctattgggaatgtgtctacctattgatggtg
acgatgtctacagtgggctacggggatgtctatgcaaaaaccaccttggggcgcctgttt
atggtcttcttcatccttggtggtttggccatgtttgccagctacgtccctgaaatcata
gagttaataggaaaccgcaagaaatatggtggttcctatagtgcggttaatgggagaaag
catattgtggtctgtggtcatattaccctcgaaagtgtctccaacttcctcaaagacttc
ctacacaaggacagggatgatgtcaatgtagaaattgtttttctccataatatttcccct
aatcttgagctggaagccttgttcaaacgccactttacccaagtagagttctaccaggga
tctgttctcaaccctcacgacctggccagagtgaagatcgagtcagcagatgcctgctta
atcctagccaacaaatattgtgcagatccagatgctgaagatgcctctaacatcatgagg
gttatttcgatcaagaactaccatcctaagatcagaataatcacacagatgttacaatat
cacaacaaggcccatctgctgaacattccaagctggaactggaaggagggtgacgatgct
atctgcctggctgagctgaaggcaggcttcatagcccagagctgtctggcccagggcctg
tcgaccatgctagccaacctcttctccatgagatcctttattgagattgaggaggacaca
tggcagaagtattacctagaaggagtggctaatgagatgtacacagagtatttgtccagt
gcctttgtgggcctctccttccccactatctgtgagctgtgttatgtgaagctgaagctt
ttgctcattgccatcgaatacaagtctgagcagagagagagcagaagccgaaagcgcatc
ctcatcaaccccggcaaccatgtcaagatgcaggagggaacactgggattctttatcgcc
agtgatgccaaagaagtaaagagagcatttttctactgcaaagcttgtcatgacgacatc
acagaccctaagcggatcaagaagtgtggctgcaaacgacttgaagacgagcatccatca
actctctcgcccaaaaaaaagcaacgcaacggagggatgcgaaactcacccaactgctcg
cccaaaatgatgagtcgacacgacccccttctaattcctggaaatgagcaaatcgagagc
atggacatgaacgtgaagaggtatgactcgacagggatgtttcactggtgcccatcaaag
gacatcgaaaaagtcatcctgacccggagtgaagcctccatgacagtgctgagcggccat
gtggtggtctgtatatttggggatgtcacgtccgctttagtggggctgcgaaacttggtg
atgcctttaagagccagcaacttccattaccacgagctaaagcctatagtttttgtgggc
tcgctggattacctgcggagagagtgggagactttacacaacttccccaaggtctccatc
ttacctggtacaccattaagtcgggcagatttaagggctgtcaacatcaacctctgcgac
atgtgcgtaatactgtcagccaatcagaacaatatcgaagatgcctcactgcaggataag
gaatgcatcttggcatcactcaacatcaaatctatgcagtttgatgacagcattggggtc
ttacaggctaattcccaaggtttcacgcctcctggaatggacaggtcatctccagacagc
agtccagtacatggctttgtgcgtcaggcttctgtcaccaccggatccaacatccccatc
atcacagagctagtgaacgactcaaacgttcagttcctggaccaagatgatgatgacgac
ccagacacagagctgtacctcactcagcccttcgcctgcggcaccgccttcgctgtcagt
gtacttgactccctgatgagcgcgacatacttcaatgataacatcctcacgctgattcgg
acactggtcacagggggagccacaccagagctggagggcctgttggctgaggagaatgct
ctcagaggaggctacagcacaccgcagacactggccaatagagacaggtgtcgcgtcgcc
cagctagccctctacgatgggccatttgccgacttgggggatggcggctgctacggagat
ttgttctgtaaagcattgaagacgtacaacatgctgtgttttggaatctacagattaaga
gacgctcatctcaatgcaccaagcgggtgtacaaaacgatatgtgatcacgaacccaccg
tatgagtttgagctcgtgcccacagacctgatcttctgcctcatgcagtttgaccacaac
gcaggccagtcccggacaagcttgtcccactcttcccactcctcccattcctccagcaaa
aagagctcctccgtccactccatccctccctccaaccggcagaaccgcagcagtaagacc
cgggaggcccgcgacaaacagaatgcaacaaggatgaatagaatgggccaagaaaagaaa
tggtttacagatgaaccagaaaatgcctacccacggaacattcagatcaagcccatgagc
actcacatggccaaccaagtcaaccaatacaaatccactagtagtctgattccaccaatc
agagaagttgaagatgaatgctga
DBGET
integrated database retrieval system
