Micropterus salmoides (largemouth bass): 119916971
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Entry
119916971 CDS
T07309
Symbol
cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04514
Cell adhesion molecules
msam04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119916971 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119916971 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119916971 (cdh5)
04090 CD molecules [BR:
msam04090
]
119916971 (cdh5)
Cell adhesion molecules [BR:
msam04515
]
Cadherins
Major cadherins
119916971 (cdh5)
CD molecules [BR:
msam04090
]
Proteins
119916971 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Nse5
Motif
Other DBs
NCBI-GeneID:
119916971
NCBI-ProteinID:
XP_038592908
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MMAWLQLWSMGLMATMALSVSLAGTEDSGLAVVEEEKQGPVEIVKKESHPVLFRQKREWI
WNSLYVEEEKPAPIAYKIGQLKSSQTVEAKSFKIEGEGANDIFTVDHKGDLFVTRSLDRE
EKNTYHLTARMYDGNNKLIEDSGEFVVQVTDINDNSPVFPITYNGSIRERSSIGTKVVEV
RATDADDPTTANGELRYSLIQDLSAFEIHSITGMISCKINTLDRETKSQYVVVVKAQDMR
GMASGSTATTSVTVTITDINDNIASFTRGIYELQVPEDHKLNEKIGTLELEDKDQIQNKL
PFFTIPSENSKVFNIELSPNKDGNLMLKQALDYETKHSYTFTVQVGEKDLHFPADNAKSA
VTTARVNIKVLDVDEPPVFSQNIYTFTVVEERIVNFIGTVTARDPDKANNVIRYSILDKD
CPISVNPLTGQLSTLRVLDRELEATHMFQIKAQEEPSGLESFVKVNIIVEDINDNKPELS
VDEIFVCENDITDTVIGTLRAMDKDDHPASFRFSLANESSNFTIRDYGNGTADVMVKHGP
FSLDDPKDYSVDVRISDGGRPIQTSITKLAIKSCRCDARRVYTHCKAGARRMGVSVHALV
AILLCILTILVIVILFVMRKRYQKDSLASMKNSGEIHEQLVTYDEEGGGEMDTNGYDVSI
LSSACHDGSLLRHPDHHPHPSLYAMVQKPPHHSQPTACKGDMAVMIEVKKDEADHDRDGF
PYDTLHIYGYEGPESLAGSLSSLDSSSTDSNLDYDFLNDWGPRFKTLAELYGVDGPDYYH
QY
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttggctccaactgtggtccatggggctaatggccacgatggctttgtccgtc
tctcttgctggcacggaagattctggccttgctgtggtagaagaagagaagcaaggccct
gttgagattgtgaagaaggagtctcatcctgtcctattcaggcagaagagggaatggatt
tggaactctctttatgtggaggaggagaaacctgcacccatcgcctacaagataggacag
ctcaaatcgagccagacagtggaggcaaagagctttaaaatagaaggtgaaggagcaaac
gacatcttcactgtggatcataaaggtgacctgtttgtcaccagatctctggacagagag
gagaagaacacctaccatttaactgccaggatgtatgatgggaacaacaagttgatagag
gactctggagaatttgttgtccaggtgacggatatcaatgacaacagccccgttttcccc
ataacatataatggatccattagggagagatcctcaataggaactaaagtagttgaggtg
agggcaactgatgctgatgaccccaccactgctaacggagagctcaggtactctttgatc
caagacctatctgccttcgaaatccacagcatcacaggtatgatcagctgcaagatcaac
actctggaccgggaaaccaagagtcagtatgtggtggtggttaaagctcaggacatgaga
ggaatggcctctggcagcacagccaccacctctgtcaccgtcaccatcaccgacatcaac
gacaacattgcttctttcaccagagggatatatgagctgcaggttccagaggaccacaag
ttgaatgagaagataggaacattggagttggaggacaaagatcagattcagaacaaactt
cccttcttcaccattcccagtgagaacagcaaagtgtttaatattgaactcagccctaac
aaggatggcaacctcatgctcaaacaggctctggactacgagacaaagcacagctacacg
ttcactgtccaggtgggagaaaaagatctgcattttcctgccgacaacgcgaaaagtgcg
gtcaccacagccagggtaaacatcaaggtgttggatgttgacgagccgccagtcttctcc
cagaacatctacactttcactgtggtggaagaacgtattgtgaacttcataggaacagtc
acagccagagatcctgacaaagccaacaacgtcatacggtactccatcttagacaaggac
tgtcccatcagtgtcaacccgttaacaggtcagctgtccaccctgagggtcctggacaga
gagttagaggccacacacatgtttcaaattaaggcacaggaggagccaagtggtttggaa
tcatttgtgaaagttaacattatagttgaggacatcaatgacaataagcctgaattgtct
gtggatgagatctttgtatgtgagaacgacatcactgatacggtgataggaaccttgaga
gccatggataaagacgaccacccggcttcattccgtttcagcctggccaatgagagctcc
aacttcaccatcagagactatggcaacggcacagcagacgtcatggtgaaacacgggcca
ttcagcctggatgaccccaaggattacagtgtggatgtgcgcatcagtgacggaggacga
cccatccagaccagcatcaccaaactggcaatcaagtcgtgtcggtgtgacgccagaagg
gtttatacgcattgcaaagctggcgctcggaggatgggagtgagtgttcatgccctagta
gccattctgctctgcatactgaccatactggtcatagtgatcctgtttgtgatgaggaaa
cgctaccagaaggattctctggccagcatgaagaacagcggagagattcacgagcagctg
gtcacatacgatgaggagggaggaggagagatggacactaatggctatgatgtctcaatc
ctctcttctgcttgccacgatggctccctactccgtcacccggaccaccacccccacccc
tctctgtatgccatggtccagaaaccccctcaccactctcaacccactgcatgtaagggt
gacatggccgtgatgatcgaggtgaagaaagacgaggcggatcacgacagagatggcttc
ccgtacgacactctccacatctatggctacgagggaccagagtctttagcgggaagtctg
agctctctggacagttcgtccactgattcgaacttggattatgacttcctgaacgactgg
gggccgaggttcaagaccctggccgagctgtacggtgtggatggacctgactattaccat
caatactga
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