Micropterus salmoides (largemouth bass): 119917889
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Entry
119917889 CDS
T07309
Symbol
optn
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04137
Mitophagy - animal
msam04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119917889 (optn)
04137 Mitophagy - animal
119917889 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119917889 (optn)
Membrane trafficking [BR:
msam04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119917889 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119917889 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
119917889 (optn)
Xenophagy
Cargo receptors
119917889 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
zf_C2H2_10
DUF4795
ATG16
DUF2019
CENP-F_leu_zip
PUMA_CC
EDR4-like_1st
IL5
Motif
Other DBs
NCBI-GeneID:
119917889
NCBI-ProteinID:
XP_038594229
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MAGEAAGGEGLPGEQVGGSSGPHGSTDARKPGAEQEDGSGGEERGALGDLLASNQSAELD
ALRAQVARLQAEKNDLVAMNSELQLKADQDSHDDSFIEIIRVSDGGVNGVNDVCGSERSR
RPDLSMTASRLDSEEVTVSQLLQSLRNETQRAERLQAELQSSAARIRELEERKSNVQEST
QTTQAEPETKEDSGKEEKVFTQSESGRKYISCMWMFSYPIVMQIFQAASEVENLKSQMMT
LFKELQQAQSKLDEAEGMKKNLQDRCREVEQDVATLKAQLVEKQAVQSENDRLKLQLDSM
QAQNQMEQRKAGEDRNNLAQLKDAYTKLFEDYNELKEEKKKRESLLVQKEVVDELQVRLT
AAEEALAAKQNKIDEMKQEIFQKEKELETISVFQAQAEVYSSDFYAERAAREKLHEERER
LAAQLEYVKKQNTHLQEEMDSLGRRSLNEMQKRHVGGNPHGAGAALVGRGADWQHQGNIP
EHACPKCNEILPDLDSLQIHIMDCIN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagaagcagcgggaggagagggacttcctggagagcaggttggaggaagctcg
gggccgcatggcagcactgacgctcgaaaaccaggagctgagcaggaggatggaagtgga
ggggaagaacggggagccctgggagacttgctggcatccaatcagagtgcagagctggat
gccctgcgtgcccaggtcgctcgcctgcaagcagagaagaacgacctggtggccatgaac
tctgagctgcagctgaaggcggaccaggactcgcatgacgactccttcattgagatcatc
agggtttcggatggaggtgtcaatggtgtgaacgacgtgtgcggttcagagcgcagcaga
cgtccggatctgagcatgacggcgtcccggctggacagcgaggaggtgaccgtcagccag
ctcctccagtcactgaggaacgagacgcagcgggctgagcggctgcaggccgagctgcag
tcctctgctgccagaattagagagctggaggagaggaagagcaatgtacaggaatcaaca
cagaccacccaagcagagccagagaccaaggaggattctgggaaagaggaaaaggtattt
actcaaagtgaaagtggcaggaaatatattagctgtatgtggatgtttagttatcctatt
gtaatgcaaatatttcaggcagcctctgaggtggagaatctcaagtctcagatgatgacg
ctgttcaaagagctgcagcaggcccagagcaagctggatgaagcagaaggcatgaagaag
aacctgcaggacagatgtcgggaggtggagcaggacgtggccactctgaaggcccagctg
gtggagaaacaggctgtgcagtcagagaacgaccggctgaagctgcagctggacagcatg
caggcccagaaccagatggagcagaggaaggcaggggaggacaggaacaacctggcccag
ctgaaggatgcctacaccaagttgtttgaagactacaatgaactcaaagaggagaagaag
aagagagagtctctgctggtgcagaaggaggtggtggacgagctgcaggtccggctgact
gccgccgaagaggccctggctgctaaacagaacaaaattgatgaaatgaagcaggagatc
ttccagaaggagaaggagctggagaccatatctgtcttccaggctcaggcagaggtttac
tcctcagacttttacgcggagagagcggcgagggagaagctccatgaagagagggagcgt
ctggctgctcagctggagtatgtaaagaaacagaacacccatctgcaggaggagatggac
tcactgggccggcggtcgctaaacgagatgcagaagagacatgtggggggaaatccacac
ggagctggtgctgctctggttggaagaggtgctgactggcagcatcaggggaatattccc
gaacacgcctgtcccaagtgcaatgagatcctgcccgacctggactccctgcagatccac
atcatggactgcatcaactag
DBGET
integrated database retrieval system