Micropterus salmoides (largemouth bass): 119919180
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Entry
119919180 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: nesprin-2-like
KO
K19326
nesprin-1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119919180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119919180
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
119919180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
KASH
Spectrin_SYNE1
SYNE1
SR_desmoplakin_3
Paramyx_P_V_C
DUF2270
Motif
Other DBs
NCBI-GeneID:
119919180
NCBI-ProteinID:
XP_038595571
LinkDB
All DBs
Position
Unknown
AA seq
1341 aa
AA seq
DB search
MSGYVTLNKNYTERLHMLSRQWVESMTRLSDMNRELQAEHQHSQSFQEKCKNLTSIQTKL
EEQFISKKDENYSSLQEMLTVHQRLEVVMNIGHQILQGILCHAVESVEKETGEKRSKLMA
QVTCMRESWLNSVALADQHRSLIKEQLGQWRVYHHGLKLLWKLMMDVDPLLPPAGPALCT
LHQLRSCTDNFQCVEDALGLHSTVYTQTLEAGRHLCKTMTGSECQSRLQSDLQAIQEAWE
QTTSLLERRRALISTTVQKYSQCQDGITSIMSELDELKVMIKQTLPERPYSSEDKEHLQE
TELSLQRLASGLRELTTMKTDLSQYVAAGDSALLEQQLEQLXSQWEELCMKVSLRRQEIA
DRLNAWTIFNDKNKEFHDWLTQMENKVCHSGDLSIEEMVEKLKKDCMEEINLFSENKSHL
KQLGEQLLLASDEAKQTRVHGSLLEVNQRWHNLFHHIEARVKKLKETLVTVQQLDKNMSN
LRSWLSRMESELSRPITYSVCHHQEIQRRLAEQQELQRDIEQHTEGVVSVISLCDVLLRD
EDAAGGTEVENDSLQETSHSLDQRWRTICAMALDRRLRIEETWRLWCKFLDDYSRFEDWL
KIAERTAANPSSADVLYTVAKEELKKFESFQRQVNERLTQLELVNNQYRRLARENRTDRA
SQLKAMVHEGNRRWDTLHRRVAAILRRLKYFTSQREEFEGTRENMLVWLTELDLQLTNVE
HFSESDIHHKIQQLNSFQKEITLNTERIDGLIVFGEGLIQKSSPQDAALIEDELEELHSY
CQEVFSRLVRFHQRLSQPPTIKEEPEISSTSFSLESSLELIGRPWLGRSQGSLPATPTHL
LASPLERSGRETPVSVDSLPLEWDHTGDVGGSSSHEDDEVEEGEHEDERIYFSASEVELT
ESQEEYVEAPEALQASSLVSSRSMAAHDSPRWRSQEDKETESLQLDSEGHTEAPPNLTST
PLKQGYLHLMSQCSGSIEDIKRVSLILDDEEQPEELGLTGLTASDKQSGVIERWELLQAR
SRSYQHDGLQEPQELISDLDDITSWLEDVIPELERLQQVDPAASVEDMATRAKELKEMQK
TFTRYKSVMLSVNLRAQEAPELQERLARMNRDWSRACTGLQQWDTSMRKTLMRCQEFHET
LHSLLLWLAHAESRRYAVDISHPDTPVRALQHHHKTLTNLQEELDGRQTQQASLQALWSQ
LQPEDEAEESDEAQEKLHVTSSKLKLLLRQVDQDLSTLQQRLDRESSEVQGQSTSADLSE
EATNSKKGSSSQREKRDSPPPRSFFSRVLRAAFPLHLLLLFLLLLPCLIPMSESDPSCTG
ANNFAWSFYPMLRYTNGPPPT
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctacgtgacccttaacaaaaattacacagaaagactgcacatgctcagcagg
caatgggttgaaagcatgactcgcttgtctgacatgaacagagagctgcaggctgagcat
cagcattctcagagctttcaggaaaagtgtaagaacctgacgtctatccagacgaagctt
gaggagcaattcatctccaaaaaagatgaaaattactccagtctccaagagatgctgact
gtccatcagagacttgaggttgtaatgaatattggacatcagattctgcagggtattctc
tgtcatgccgtcgagtctgtggaaaaagaaacgggagagaaaagatctaagctcatggca
caagtgacctgtatgagggagagctggttgaactctgtggctctggctgaccagcacagg
tccctgataaaagaacaactgggccagtggagagtctaccatcatggcttgaaacttttg
tggaagttgatgatggacgttgaccctttgttgccccctgctggacctgctctctgtaca
ctgcatcagctacggagctgcacagataattttcagtgtgtggaagacgctctgggtttg
cactccactgtgtacacccagactctggaggctggcaggcatttatgtaaaaccatgacg
gggtctgagtgtcagagccgactgcagtcagacctccaggccatacaggaggcctgggaa
caaaccacttcactgctggagaggagaagagccctaattagcacaacagttcagaagtat
tctcagtgtcaggatgggataaccagcatcatgtctgaactggatgagctgaaagtcatg
ataaaacagacgctgcctgaaagaccgtacagctcagaggacaaggaacaccttcaggag
acggagctctctctgcagcgtctggccagtggattgagggaattaaccaccatgaagacg
gacctgtcccagtacgttgcggccggtgactcggctctgctggagcagcagctggaacaa
ctcnacagccaatgggaagagctgtgtatgaaggtgtccctgcgcaggcaagaaattgca
gaccgtctcaatgcctggaccatcttcaatgacaagaacaaagagttccatgattggctg
actcagatggagaacaaggtgtgccacagcggggatctgagcatcgaggaaatggtggag
aaactgaaaaaggactgcatggaggaaatcaacttgttcagcgagaataagagccacctg
aagcagctgggtgagcagctgctgttagccagtgatgaggctaagcagacccgggtccac
ggctcgctgctggaggtcaaccagcgctggcacaacctcttccaccacatcgaagccagg
gtaaagaaactgaaggagactctggtgacggtgcagcagctggataagaacatgagtaac
ctccgctcgtggctttcacgcatggagtccgagctgtccagacccatcacctacagcgtc
tgtcaccaccaggagatccagaggaggctggctgagcagcaggagctgcagcgggacatt
gagcagcatacggagggcgtagtgtcagtaatcagtctgtgcgatgttttgctgcgggac
gaagatgctgctggtggcactgaggtggagaacgactccctgcaggagaccagccacagc
ctggaccagcgctggaggaccatctgtgccatggctctagacaggaggctcaggattgag
gagacgtggcgactgtggtgtaagttcctcgatgactactcgcggttcgaggattggctc
aagatagccgagcgcacagctgccaaccccagctctgcagacgtcctttatacggtcgcc
aaggaggagctcaagaagtttgagagtttccaaaggcaggttaatgagcggctgacccag
ctggaactggtcaataaccaataccgccgcctggccagggagaaccgcactgaccgagcc
agccaactcaaagccatggtgcacgaaggcaaccgccgctgggacaccctgcaccgcaga
gtggccgccatcctccgcagactcaagtactttaccagccagagggaggaatttgaaggc
accagggagaacatgctggtgtggctgaccgagctggacttgcagctcaccaatgtcgaa
cacttttcagagagcgacatccatcacaagatacaacagctcaatagcttccagaaggag
atcaccctgaacacagagcgcatcgacggcctaatagtgtttggagagggtctgatccag
aaaagctccccgcaggatgcggcgctgattgaagacgagctggaggagctgcactcctac
tgccaggaggttttcagcagactggtccgcttccaccagcgcctcagccagcccccaaca
atcaaagaagaaccggagatctctagtacatccttttctttggagtcgagcttggagctg
attggccggccgtggctggggcggagccaaggaagcctcccggccacacccacccacctg
ctggcctctccgctggagcgttcggggcgggagaccccagtgagcgtggactccctgccg
ctggagtgggaccacaccggagacgttggagggtcatcctcacatgaggatgatgaggtg
gaggagggggaacatgaagatgagagaatttacttcagcgcatcagaggtggagttgact
gagagccaggaggaatatgtcgaagccccagaggcgctacaagcctcctcactggtttca
agcaggtccatggccgcacatgactctccaagatggcgatcacaggaagacaaggaaaca
gagtctctccagctggactcggagggccacaccgaggctccacccaatctcaccagcacc
cctctaaagcagggctatttgcatctcatgtctcagtgcagcggcagcatcgaggacatt
aaaagagtctcactgatcctggacgatgaggagcagccagaggagctcggtctcacagga
ctgactgcctcagacaaacagtcaggtgtgatcgaacgctgggagctccttcaggctcgg
tccaggagctaccagcacgatggccttcaggaacctcaagagctcatctctgaccttgat
gacatcacttcctggttagaagacgtgatcccagagctagagcgcctccagcaggtggac
ccagcagccagtgttgaggacatggcaaccagagccaaagaactaaaggagatgcagaag
acatttactcgctacaagtctgtgatgctgtctgtcaacctgcgagctcaggaagctcca
gagcttcaggagagactggcacgtatgaacagagactggagcagagcgtgtacaggcctc
cagcagtgggacaccagtatgaggaagacgctgatgcgctgccaggagttccatgagacc
ctccactctctgctgttgtggctggcccacgcagagagcaggcgctatgcggtggacatc
agtcacccagacacacctgtcagggccctgcaacaccaccacaagacactcacaaatctg
caggaggagctagatggcaggcagactcagcaggcctcactccaggctttgtggtctcag
ctccagcctgaggatgaggctgaggagagcgacgaggcccaggagaaactccacgtgacc
agtagcaaactgaagttactgctgaggcaggtggaccaagacctcagcaccctgcaacag
cgcctggatcgtgaatcatcagaagtccaaggccaaagcacttctgcagatctttctgag
gaggccacaaattcaaagaaaggttcctctagtcaaagagagaagagggactcaccccca
cctcgttccttcttctcccgggtccttcgtgcagccttccccctccacctcctcctactg
ttcctcctcctcctgccctgtcttattcccatgtcagagagcgaccccagctgtacaggg
gccaacaactttgcctggtccttctaccccatgttacgctacaccaacggcccaccaccc
acctga
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