Micropterus salmoides (largemouth bass): 119919223
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Entry
119919223 CDS
T07309
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msam03041
]
119919223
Spliceosome [BR:
msam03041
]
Common components
Common spliceosomal components
General mRNP proteins
119919223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
119919223
NCBI-ProteinID:
XP_038595587
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MADDFDVEAMLEAPYRKDEIKSSHANGHDDQNKKKRRSRSRSRSPGSRKRRSRSKDKKKG
KKRSRSRERKRSRSRERHRSGSRSKERSGRYKARKSPVRKRSKSRSPFKKEKSPIRQPID
NLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVE
ASSVPLAIGLTGQRLLGVPIIVQASQVMAEKNRAAAAANNLQKGSSGPMRLYVGSLHFNI
TEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM
KVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQM
TGSIPFGNIAAPPAVPTPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPSWAIEIQDDV
IEECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPT
YHNLFPDSVTAKQLLMPARR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgttgaggccatgctggaggctccatacagaaaggatgagatc
aagtcctctcatgcaaatggacacgacgaccagaacaagaagaaaagaaggagccgaagc
aggagccgaagtcccggctctaggaagagaagaagcagaagcaaagacaaaaagaagggc
aagaagaggagcaggagccgagaaagaaaacgtagccgtagcagagagcgccatcgcagc
ggctcccgaagcaaggaacgttctgggcggtacaaggcacgcaagagccccgtccgtaaa
cgttccaaaagccggagccccttcaaaaaggagaagagtcccataaggcaaccaattgac
aatctaacaccagaggagagggatgctcgcacagttttctgcatgcagcttgctgcaaga
atcagagccagagacctggaagacttcttctcggctgtgggaaaagtaagagatgtgaga
atgatctcggacagaaactccaggaggtcaaagggcattgcatacatcgagtttgtggag
gcttcttctgtgccactggcaattggattgactggccagaggcttttaggagtgcccatc
atcgtccaggcctctcaggtcatggcagagaaaaacagagctgcagctgctgccaataat
ctacagaagggcagttcgggtccaatgcggctgtacgtgggctcgctgcacttcaacatt
actgaagaaatgcttcgagggatctttgagccttttgggaagattgagggaatccagcta
atgatggacagtgaaactggacgatccaaaggatatggcttcatatcgtttgcagatgca
gaatgtgcaaaaaaggccttggagcagttgaatggctttgagctggctggacgtccaatg
aaggtggggcatgttacagagcgctcagactcgtcgacagccagctcatttctggacaac
gatgaattggagaggaccggcatcgacctcggcaccacaggacgtctacagcttatggca
cgactagcagaaggaactggtctaaagattcctcctgctgctcagcaggctctacagatg
actgggtccataccctttggaaacatcgctgctccaccagctgttccaactccagctcca
agccaagccttgaacctcccatcacagccgctggccacacactgccttcagctgtccaac
ctgttcaacccacaagcggaaaacgatcccagctgggccatcgagatccaagatgatgtt
attgaggagtgcaacaaacatggaggaatagttcacatttatgttgataagaactccgct
caaggtaatgtgtatgtgaaatgtccctcaataccagcagcgatggcaactgtaaatgca
cttcatggacgctggtttgcaggcaaaatgatcacagcagcctacgttcccttaccaacc
taccacaaccttttccctgattcagtaacagcgaagcagcttctaatgccggcacgtcga
tag
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