Marinobacter salinisoli: LPB19_00945
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Entry
LPB19_00945 CDS
T09746
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msan
Marinobacter salinisoli
Pathway
msan03030
DNA replication
msan03430
Mismatch repair
msan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB19_00945
03430 Mismatch repair
LPB19_00945
03440 Homologous recombination
LPB19_00945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msan03032
]
LPB19_00945
03400 DNA repair and recombination proteins [BR:
msan03400
]
LPB19_00945
Enzymes [BR:
msan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB19_00945
DNA replication proteins [BR:
msan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB19_00945
DNA repair and recombination proteins [BR:
msan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB19_00945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DNA_pol_A_exo1
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
QSP95023
UniProt:
A0ABX7MRU1
LinkDB
All DBs
Position
complement(197661..199112)
Genome browser
AA seq
483 aa
AA seq
DB search
MVSRKSHLQDTTFAFLDIETTGGSAARDRITEIGIRFWRAGEQVGEWQTLLNPDVRISSF
IEHFTGITNEMVADAPRFEDIADELESQLEGAVFVAHNARFDYGFIKQEFRRLGRLFTAK
VLCTVKLSRRLYPEFRRHNMDALIERHGLAQVQRHRAMGDVEAMLSFFLHAKTEKGDEAL
EAAIADLLQTPSVPSHLPPDILHELPRGPGVYRFYGENDALLYVGKSTHIAQRVASHFSG
DHNSSRGVRMSESLRRVEWTETAGELGALLLELKQIKSLNPLYNRRSRAAKRLVTIELVE
NDQGFLQARLVRELEPHRLGDYYGLFRSKRDAEKALSGIATKNELCNKLLGLEPDHSGPC
FQRTLGRCKGACEGVEDGVRYNLRMQIAFHGLRLKTWPWDGPVGVVERNAATGVTDILII
YNWVHLGTVHDEQTLHDFAAGNESVTFDLDSYKLLVKALLDRGGKGRKIIEMPALKTPDV
VMP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggtcagccgcaaatcacaccttcaggacaccaccttcgccttcctcgacatcgaaacc
actggaggcagcgccgctcgcgaccgcatcaccgaaatcggcatccgtttctggcgtgcc
ggtgagcaggtgggggaatggcaaacgctgctcaacccagacgtgcgcatctcttctttt
attgagcatttcaccggcatcaccaatgagatggtggcagacgcgccccggtttgaagac
atcgctgatgagttggagtcgcagctcgagggggctgtgttcgtcgcccacaacgcccgt
tttgactatggcttcatcaagcaggagttccggcggctcgggcgtctgttcaccgcgaaa
gtgctgtgtacggtcaagctgtcacgccggctgtatccggaattccggcgtcataacatg
gacgcactgatcgaacgccacggcctggcgcaggtgcagcgccaccgggcgatgggtgac
gtggaggccatgctgtcgttcttcctgcatgccaagacagagaagggcgatgaggccctt
gaggcggcgatcgctgacctgctgcaaacccccagcgtgccgtcccacctgccaccggac
atccttcatgagttgccaagggggccgggcgtgtaccgtttttacggggaaaacgacgcc
ctgctgtacgttggcaaaagcacccacattgctcagcgggtggcgtcgcacttttccggt
gatcacaactccagccgcggcgtgcgcatgtccgaaagcctgcgccgggtggagtggacg
gaaaccgccggtgaactgggggccctgttactggagctgaaacagatcaaaagcctgaac
ccgctctacaaccgccgctctcgggccgccaagcggctggtgaccatcgagctggtggag
aatgatcagggctttctgcaggcgcgattggttcgcgagctggaaccgcaccggctgggg
gattactacgggctgtttcgcagcaagcgcgatgcggaaaaggcgctcagtggtatcgcg
acgaaaaacgagttgtgtaacaagttgctgggtctggagccggaccacagcgggccctgc
ttccagcgcacgctgggtcggtgcaagggcgcgtgcgagggtgtggaggacggcgtccgc
tacaacctgcgcatgcagatcgcgtttcatggcctgcggctgaaaacctggccgtgggac
gggccggtcggcgtggtggagcgcaatgccgccaccggcgtgacagacatcctgatcatc
tataattgggtgcacctgggtaccgtccatgacgagcagacgctgcatgactttgccgct
ggcaacgagtcggtcacgtttgatctggactcttacaagttactggtgaaagcgctgctc
gaccggggcggaaaggggcggaaaattatcgagatgccggccctgaaaacgccggatgtg
gttatgccatga
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