Marinobacter salinisoli: LPB19_01040
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Entry
LPB19_01040 CDS
T09746
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
msan
Marinobacter salinisoli
Pathway
msan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPB19_01040 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msan03019
]
LPB19_01040 (pnp)
03016 Transfer RNA biogenesis [BR:
msan03016
]
LPB19_01040 (pnp)
Enzymes [BR:
msan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LPB19_01040 (pnp)
Messenger RNA biogenesis [BR:
msan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LPB19_01040 (pnp)
Transfer RNA biogenesis [BR:
msan03016
]
Prokaryotic type
tRNA degradation factors
LPB19_01040 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QSP96413
UniProt:
A0ABX7MW79
LinkDB
All DBs
Position
complement(223249..225372)
Genome browser
AA seq
707 aa
AA seq
DB search
MNLTPTKKTFELGGKTVTLETGRIARQATGAVLVTIDDVSVLGTVVGAKEPKPGQGFFPL
TVNYTEKTYAVGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGYMNEVQVVLTVMS
ANKTQDPDIAAMLAASAALAISGIPFDGPIGASRVAFTNERGYFLNPTFEELETSLLDMV
VAGTDEAVLMVESEAKGLTEDQMLGAVLYGHQEMQSAITAIKEFAAEIGKPRWEWQPEQE
NTELLNAIKGEFAGQIEEAYTIRDKMERYARLGEIKAAAVEKLAGEEEGQPSEEEVKKYF
GKIEKSVVRNQVIDGKPRIDGRDNKTVRPIEIEVGVLPSTHGSALFTRGETQAIVTATLG
TARDMQIIDALEGERKDPFLFHYNFPPYSVGEAGRMGSPGRREIGHGRLAKRGVAAVMPT
IDEFPYTIRAVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLVKEGDKFAV
LTDILGDEDHLGDMDFKVAGTKDGVTALQMDIKINGITDEIMEIALDQAHDARLHILGEM
NKVIAESRPELSARAPSITAIKINPDKIRDVIGKGGATIRSICDETGASIDLDDDGNVKI
YAEDQAAAQAAVKRVMEITAEIEVGAIYSGRVERIVDFGAFVNILPGKDGLVHISQISDR
RIENVTDELSEGQEVLVKVLDVDNRGRVKLSMKEVKEGEQPTDFSAE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ctgaatctaacccctaccaagaaaacgtttgaactgggtggcaagaccgtcaccctggaa
actggtcgtatcgcgcgtcaggcaaccggcgccgtgctggttaccatcgatgacgtgtcg
gttctgggtaccgttgtcggtgccaaagagccgaagccgggccagggcttcttcccgctg
acggtgaactacaccgaaaaaacctacgctgtgggcaaaattcccggtggtttcttcaag
cgtgaaggtcgcccgtctgagaaagaaaccctgacctcccgtctgatcgaccgtccgatt
cgtccgctgttcccgaacggttacatgaacgaggttcaggtcgtgttgacggttatgtcc
gccaacaagactcaggacccggatatcgcggcgatgctggctgcctcagcggcgctggcc
atttccggcatcccgttcgacgggccgatcggtgcttcgcgtgttgcgttcaccaatgag
cgcggctatttcctgaatccgacctttgaagagctggaaacctccctgctggacatggtt
gtcgcgggtaccgacgaagccgtactgatggttgaatccgaagccaagggcctgacagaa
gatcagatgctgggcgcggttctgtatggccatcaggaaatgcagtctgccatcaccgcc
atcaaagagtttgccgctgaaattggcaaaccccgctgggaatggcagccagagcaggaa
aacaccgaactgctgaacgctatcaaaggcgagtttgccggtcagatcgaagaagcctac
accatccgtgacaagatggagcgttatgctcgtctgggtgagatcaaggcagcggcagtt
gagaagctggctggtgaagaagaaggccagccttccgaagaggaagtgaagaagtacttc
ggcaagattgagaagtcggttgttcgcaaccaggttatcgacggcaagccgcggatcgat
ggtcgtgacaacaagaccgttcgcccgatcgaaatcgaagttggcgttctgccaagcacc
catggttcggcgctgttcacccgcggtgaaacccaggccatcgtgactgcaactctgggc
actgcccgtgacatgcagatcatcgatgcgctggaaggtgagcgcaaggacccgttcctg
ttccactacaacttccctccgtactcggtcggtgaagccggtcgtatgggcagcccgggc
cgtcgtgagattggtcacggtcgtctggccaagcgtggtgttgccgcggttatgccgacc
attgatgagttcccgtacaccatccgtgcggtatccgagatcaccgaatccaacggttcc
agctccatggcgtcagtctgtggctcaagcctggcactgatggatgcgggtgtgcctctg
aaggcgccggttgccggtatcgccatgggtctggtgaaagaaggcgacaagttcgcggtt
ctgaccgatatcctgggtgacgaggatcatctgggcgacatggacttcaaagtggccggt
accaaagacggcgtgaccgcgctgcagatggacatcaagatcaacggtatcaccgacgag
atcatggaaatcgctcttgatcaggcgcacgatgcccgtcttcacatcctgggtgaaatg
aacaaggttattgccgaatcacgtccggaactgtccgcacgtgctccgagcatcaccgcg
atcaagatcaacccggacaagatccgtgacgtgattggtaagggtggcgcaaccatccgc
tccatctgtgacgagactggcgcgtccatcgacctggacgacgacggcaacgtgaagatt
tacgcggaagatcaggcggctgcacaagccgcggttaagcgtgtgatggaaatcaccgcc
gagatcgaggttggcgctatctatagcggtcgcgtcgagcgcatcgttgatttcggtgcc
ttcgtgaacattctgccgggcaaagacggtctggtgcacatctctcagatctctgaccgt
cggatcgagaacgtcaccgacgagctgagcgaaggtcaggaagtcctggtcaaggttctg
gatgtggataaccggggccgtgtgaagctgtctatgaaagaagtgaaggaaggcgagcag
ccgaccgacttctctgccgagtaa
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