Marinobacter salinisoli: LPB19_02520
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Entry
LPB19_02520 CDS
T09746
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msan
Marinobacter salinisoli
Pathway
msan03420
Nucleotide excision repair
msan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB19_02520 (uvrD)
03430 Mismatch repair
LPB19_02520 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msan03400
]
LPB19_02520 (uvrD)
Enzymes [BR:
msan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB19_02520 (uvrD)
DNA repair and recombination proteins [BR:
msan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB19_02520 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LPB19_02520 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QSP95315
UniProt:
A0ABX7MV29
LinkDB
All DBs
Position
complement(540479..542644)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSHIIDPLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMTVDRVPPTAILAV
TFTNKAAKEMRYRIEQMMNIPARGLWFGTFHGIAHRLLRSHWQDAGLPENFQVLDSDDQL
RLVKRVMRENQIDETRWPPKQAQWFINSQKDEGLRAAHIQENPGDHFTSTMVKIYRQYEK
LCQQGGLVDFGELLLRSHELWLHRPELLAHYQKRFQHILVDEFQDTNTIQYAWLQVLASN
RVPLTVVGDDDQSIYGWRGAKIENIQQYQRDFPNARLVRLEQNYRSTQTILKAANAVIAN
NQGRLGKQLWTDGPDGEPISLYAAFNEQDEANYIADSISGWVMDGNLRSESAILYRSNAQ
SRVLEEALMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYRRDDAAFERVVNVPPRGIG
AKSLAELREYATGQGVSLWESAERLLEAGQVKGRAKTGLQSFMAIIEGLSEMADNASLQG
LMKQTIEDSGLKDYHANEKGEKGQARVENLEELVNALSDFEVEDGVDPLAEFIAQAALDA
GESQASEHEDSVQLMTLHSAKGLEFPMVFLAGVEEGLFPHNMSLEEPGRMEEERRLAYVG
ITRAMKKLVLTYAESRRLYGQEKFHALSRFVREIPGDCLQEVRLRNTVTRPAMVERPNEG
LFSQESAQQAGFSLGQRVRHPKFGEGIVLNCEGSGAHARVQVNFDDGAKWLVLAYAPLEA
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacattatcgatcccctcaacgatgcccagcgcgaagcggtcacggcc
cagaacgatcatttgctggtgctggccggcgcgggcagtggcaagacgcgagtgctggtg
catcgcattgcctggttgatgacggtggaccgggtgccgccgactgccatcctggcggtg
accttcaccaacaaggccgccaaggaaatgcgttatcgcattgagcagatgatgaacatt
ccggcccgtggcctgtggttcggcactttccatggcatcgcgcaccgcctgctgcgctcg
cactggcaggatgccggcctgccggagaacttccaggtgctggacagcgacgatcagctc
cggctggtgaagcgggtaatgcgcgagaaccagatcgatgagacccgctggccgcccaaa
caggcccagtggttcatcaacagtcagaaggatgaggggctgcgggcagcccacattcag
gaaaatcccggcgaccacttcacctcgaccatggtgaaaatctatcgccagtacgaaaag
ctgtgtcagcagggcgggctggtggattttggcgaactgctgctgcgttcgcacgaactc
tggttacaccggccggagttgctggcgcactaccagaaacgcttccagcatattctggtg
gacgagttccaggacaccaacaccattcaatacgcctggctacaggtgctggcgagcaat
cgcgtgccgctgacggtggtgggtgacgacgatcagtccatctacggctggcggggcgcc
aagatcgaaaacatccagcagtaccagcgggacttccccaacgcccggctggtgcgcctg
gagcagaattaccgctccacccagaccatcctcaaggccgccaacgcggtgattgccaat
aatcagggccggttgggcaagcagttatggaccgacgggccggacggggaaccgatcagc
ctgtacgcggccttcaatgaacaggacgaggccaactacatcgccgacagcatttccggc
tgggtcatggacggcaacctgcgcagcgaatccgccattctgtatcgctccaacgcccag
tcccgggtgctggaagaggccctgatgcgtcagggcattccgtaccgggtgtacggtggg
ttgcggttctacgaccgtcaggaaatccggaatgcgctggcttacctgcgcctggtgcag
taccgccgggatgacgccgccttcgaacgggtggtgaatgtgccgccccggggtatcggt
gccaagagcctggcggagttgcgggaatacgccaccggccagggcgtgtccctgtgggaa
tcggcggagcgcctgctggaagcgggtcaggtcaagggccgcgccaagaccggcctgcag
tcgttcatggccatcatcgaaggcttgtcggagatggccgacaacgcctcgctgcagggc
ctgatgaaacagaccatcgaagacagcggcctgaaggattatcacgccaacgaaaaaggc
gaaaagggtcaggcccgggttgaaaacctggaagaactggtcaacgcgctgtcggatttc
gaggtggaagacggtgtcgacccgctggcggagtttattgctcaggccgccctggacgcc
ggtgagtctcaggccagtgagcacgaagacagcgtccagttaatgaccttgcattcggcc
aaggggctggagttcccgatggtctttctggccggcgtggaagaggggttgttcccccac
aatatgtcgctggaggaaccggggcggatggaagaagagcgccgcctggcctacgtgggc
atcacccgcgcgatgaaaaagctggtgctcacctacgccgaatcccgccggctgtacggc
caggaaaaattccatgccctgtcccgcttcgtgcgggagattcccggcgattgtctgcag
gaagtgcgtctgcgtaacacggtcacccggcccgctatggtcgagcggccgaacgaaggg
ctgttcagtcaggaatcggctcagcaggccgggttcagtctgggccagcgggttcgccat
cccaagtttggtgagggtatcgtgctgaattgcgaaggcagcggtgcccatgcccgggtg
caggtgaacttcgacgacggcgcgaagtggctggttctggcctacgcaccgctcgaagct
tgctga
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