Marinobacter salinisoli: LPB19_03945
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Entry
LPB19_03945 CDS
T09746
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
msan
Marinobacter salinisoli
Pathway
msan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPB19_03945 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msan03400
]
LPB19_03945 (recC)
Enzymes [BR:
msan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LPB19_03945 (recC)
DNA repair and recombination proteins [BR:
msan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPB19_03945 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QSP95580
LinkDB
All DBs
Position
complement(879442..883002)
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AA seq
1186 aa
AA seq
DB search
MASQSAIPPGFYAIHANHLEDLRRAVVFLCREHPLPPLESETFLVQSNGIAQWLKLALAE
KRSGDGADGGLGIAAGMEFLFPARFIWQAYRAVLPDGEVPQQSPFDKPRLLWRLYRMLPE
LVNQDSAFTPLARFMDGQNTAMRTFQLAEKVADLFDQYQVFRADWLAAWEQGRDITISAR
GEERALDPETLWQATLWRRLVEDTGDAAHTSRSRIHTRFVEQGKQLGQPANPARLPRRIV
VFGVSSLPRQALEALSVLSRFSQVVLCVHNPCQYYWADIVSDRDLLNAERKRGARHPALS
VLTDPDLLHQHANPLLAAWGKQGRDYIRLLDEFDNPDAYRGQLETPDQKIDIFSAHGDLE
APRLLHQLQNDIYNLTPLPDIRAEQRLLDPTQDRSLAFHDAHSPQREVEILHDQLLAAFN
ADPSLRPRDIMVMVPDINLYAPHIQAVFGRYPAGSKRHIPFTISDQGQRHHEPVLIALET
LLSLPRSRFGASEILSLLEVPCIRTRFGIEEAEIPLARRWIEGANIRWGLHGQHRATLDL
PDALERNTWQAGLRAMLLGYGMGDDDAWAGIEPYGEVGGLQADLAGRLAEFVQKLETLWL
ALQVDRSPAQWELQISDLLATFFQDAEGHDLLLLNRFRRQTEQWLDDTAAAGLIEQPLAL
DIIRDVLLAGLDEGGLNQRFLAGKVNFATLMPMRAIPFRRVCLLGMNDGDYPRSRPPVDF
DLMANDYRPGDRSRREDDRYLFLEALLSAREQLYISWVGRSIRDDSERPPSVLVSQLKDH
IDALWQVAGRPAQTVTGTLTTPHPLQPFSRAYFPLSNAVDGRAEGAPRPLNEILQAGNLF
TYEREWRTAHGQQPDTNNTAALPYLAPEEPVTLGELANFLKRPIATFYQRRLQVYFDEVA
EADTDNEAFELTGLDRWQLDNELIQEAVLKADSRDELDQRLEQCLERMARRGDLGMGVTE
RRLRSDLKPRLPNLFDRHQRELAHWPEACTEPGHFSLQFQNPLGAVQIADLIPDLRRDGA
GQLCRLVIASSGLLAGSGRSGKIRYTNLLRDWVIHLAGQLTGAPFQTRILGKEENNSFQF
DPLPVEQASAYFEAIVSAWMEATTRALPVHAETAYAWIPGIQKDDPERARTEAQAAYQSA
LERDTGYLGASFESPEQLFASGEFETLVRALYLPLWENAKKSRGKA
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggccagccaatccgccattccaccgggcttttacgccatccacgccaaccatctcgaa
gacctccgccgcgcggtggtgttcctgtgccgcgagcatccgttacccccgctggagagc
gaaacctttctggttcagagcaatggtattgcccagtggctgaagctggccctggcggaa
aaacgctcgggcgacggtgctgatggcggcctcgggattgccgccggtatggaattcctg
ttccctgcgcggtttatctggcaggcctaccgggccgttctgcccgacggcgaagtgcct
cagcaatcgccattcgacaagccgcgcctgctctggcgcctgtaccggatgctgccggag
ctggtgaaccaggacagcgccttcacgccgctggcccggtttatggacggccagaataca
gcaatgcggaccttccagctggccgagaaagtcgccgacctgttcgaccagtatcaggtg
ttccgggccgactggctggcggcctgggagcaggggcgcgacatcaccatcagcgccagg
ggcgaggagcgggcgctggacccggaaaccctctggcaggcaacgctgtggcggcgactg
gtggaggataccggcgatgcggctcacaccagccggtcccgtattcacacccggtttgtg
gagcagggcaagcagcttggccagcccgccaatccagcccggttgccccggcgcatcgtt
gtgttcggcgtatcgtcgttaccccgacaggcgctggaagccctgtccgtgctcagccgg
ttcagtcaggtggtcctgtgtgtccacaacccctgccagtattactgggccgacatcgtg
agcgaccgggacctgctcaatgccgaacgcaagcggggcgcccggcaccccgcattgtcg
gtgctgaccgatccggaccttctgcaccagcacgccaatcccttgctggcggcctggggc
aagcagggacgggattacatccgcctgctggatgaattcgataacccggacgcctatcgc
gggcaactggaaaccccggaccagaagattgatattttttcggcccacggcgaccttgag
gcgcccagactgctgcatcagttgcagaacgatatctacaacctgaccccgctgccggac
atccgcgccgaacagcgacttctggacccgactcaggatcgctcgctggcgtttcacgat
gcccacagcccgcaacgggaagtcgaaatcctgcacgaccagttactggccgccttcaat
gccgaccccagcctgcggccccgggatatcatggtgatggtgccggacatcaacctgtac
gcgccccatatccaggcggtattcggacgctatccagccggcagcaaacgccacatcccg
ttcaccatctccgaccaggggcagcgccaccatgaaccggtgctcatcgctctggagacc
ctgttgtcgcttccgcgcagccggtttggcgccagcgaaatcctgagcctgctggaggtc
ccctgcatacgtacccggtttggcatcgaggaagccgagattcccctggcccggcgctgg
atcgaaggcgcgaacattcgctggggcctgcacgggcagcatcgcgccactctggacctg
ccggacgcactggaacgcaacacctggcaagccggattgcgggccatgctgctgggctac
ggtatgggcgacgatgacgcctgggccggcatcgaaccctatggcgaggtcggtggcttg
caggcagacctggccggccggctggcagaatttgtccagaagctggaaacgctctggctg
gccctgcaggttgaccgttccccggcgcagtgggaactccagatctccgacctgctggca
acctttttccaggacgccgaaggacacgatctgctgctgctaaaccgcttccggcgtcag
accgaacaatggctcgacgatactgcggccgcaggcctgatcgagcagccactggcgctg
gacattatccgcgatgtcttgctggcggggctggatgaaggtgggctgaaccagcgtttt
ctggccggcaaggtcaacttcgcgaccctcatgcccatgcgcgcaatacccttccgccgg
gtttgcttactgggcatgaacgacggcgattacccccgttcccggccgccggtggatttt
gatctgatggccaacgactaccgacccggcgaccgctcccgccgggaggatgaccgctac
ctgttcctcgaagcgctgttgtccgcccgtgagcagctctacatcagctgggtcgggcgc
agcattcgcgacgattccgaacgcccgccgtcggtcctggtgagtcagctcaaggaccac
atcgacgccctgtggcaggtggccggccgcccggcgcaaaccgtcaccggcacactcacc
acgccacatccgctccagccattcagccgggcctacttcccgctgagcaacgccgttgac
ggccgtgcagagggggcaccccggccgctgaacgagatcctgcaggccggcaatctgttc
acctacgaacgggaatggcgcaccgcgcacggacaacaaccggacaccaacaacaccgcg
gcattgccatacctggctccggaagagccggtcaccctgggcgagctggcgaactttctg
aagcggccgattgccacgttctaccagcgccgcctgcaagtgtactttgacgaggtagcc
gaggcagacaccgacaacgaagcgttcgaactgaccggactggatcgctggcaactggac
aacgaactgattcaggaagcggttctgaaggcggactcccgggacgagctggatcagcgc
ctggaacagtgccttgaacgcatggcccgccggggcgacctgggcatgggtgtcacggaa
cgacgactgcgcagtgatctgaaaccgcgcctgccgaacctgttcgaccgccatcagcgg
gagctggcgcactggccagaagcatgcaccgaacccgggcacttcagcttgcagttccag
aacccgttgggggccgtgcagatcgccgatctgattccagaccttcgacgcgatggggcc
ggccagctttgccggctggtgattgccagttcgggcctgctggcagggtccggccgcagt
ggaaaaatccgctacaccaacctgcttcgggactgggtgatccacctggccggacagctg
accggggcgcccttccaaacccgcatcctgggcaaggaggagaacaacagcttccagttt
gatccgttaccggtagagcaggcgagcgcttacttcgaggccatcgtctcggcctggatg
gaggccaccacccgcgcgctgccggtgcatgcggaaaccgcctatgcctggattcccggg
atccagaaagacgacccggagcgcgcgcgaacggaagcgcaagccgcctaccagagtgcg
ctggagcgggataccggctacctgggcgccagtttcgaaagcccggaacagctcttcgcc
agcggtgaatttgaaaccctggtgcgggcgctttatctgccactgtgggaaaacgccaag
aaatccagggggaaggcatga
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