Marinobacter salinisoli: LPB19_06265
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Entry
LPB19_06265 CDS
T09746
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
msan
Marinobacter salinisoli
Pathway
msan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LPB19_06265 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msan03021
]
LPB19_06265 (rpoC)
03400 DNA repair and recombination proteins [BR:
msan03400
]
LPB19_06265 (rpoC)
Enzymes [BR:
msan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LPB19_06265 (rpoC)
Transcription machinery [BR:
msan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LPB19_06265 (rpoC)
DNA repair and recombination proteins [BR:
msan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LPB19_06265 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Phage_DsbA
Motif
Other DBs
NCBI-ProteinID:
QSP95991
UniProt:
A0ABX7MUG9
LinkDB
All DBs
Position
1383996..1388210
Genome browser
AA seq
1404 aa
AA seq
DB search
MKDLLNLLKSQNQSKEFDAIRIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVALANVRRERMGHIELASPVAHIWFLKSL
PSRIGLMLDMTLRDIERVLYFESFIVIEPGMTTLEKGQLLNDEQYYEALEEFGDEFDARM
GAEAVKELLEGIDLQAEVDALREEIPQTNSETKIKKFSKRLKILEAFLHSGNRPGDMIMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPY
LRLHQCGLPKKMALELFKPFIFSKLEHRGLATTIKAAKKMVEREEGVVWDILDEVIREHP
IMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNVLSPANGEPIIVPSQDVVLGLYYMTRERESALGEGMVFSDVKEVHRAYGAG
MVDLQAKVKVRVKEVSVAEDGAREEIVRVVDTTVGRSLLFDIVPDGLSFDLVNKPMVKKA
ISGLINTCYRDAGLKDTVIFADQLMYMGYHYATVSGISICFNDFEIPPEKYELVDAATDE
VKDIENQYASGLLTQGEKYNKVIDIWSRANDKVSKAMMERLSKEQVIGPDGEPVKGEDGD
DLMQESFNSVYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQY
FISTHGARKGLADTALKTANSGYLTRRLVDVSQDLVVTEEDCGTTEGLLMTPHIEGGDVV
VPLGDRVLGRVTARDAYTPTDKENAVVPVGTLLDEKTIETLERAGVDEVWVRSAITCETR
HGICSKCYGRDLARGHQVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRASAVDNIQ
VKHGGTVRLHNLKSIEKSDGSLVVVSRSSALAIADEQGREREWYKLPYGAVLSVKNGDAV
EAGVAVAKWDPHTHPIIAEAEGIAKFVNMEQGISVRTQTDELTGLSTMEVIDPKDRPAAG
KDVRPGIQLLDEAGNEVELPGGATAMYFMPANALVTMANGARVELGDVVARIPQESSKTR
DITGGLPRVADLFEARRPKESSILAEISGTVSFGKETKGKKRLVITPRDGDAYEVLIPKH
RQLNVFEGETVEKGEVISDGPSNPHDILRLLGVVELAKYITNEIQDVYRLQGVVINDKHI
EVIVRQMLRKVEVTDPGDTTLLSGDQVEITQVLEENEKADAADKEPARFERLLLGITKAS
LATESFISAASFQETTRVLTEGAVTGKRDYLRGLKENVVVGRLIPAGTGLAYHSERRRKR
ELGEQGVTAADVEEALSAELNRES
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttgctgaatcttctcaagagccagaatcaaagcaaggaattcgatgccatt
cgcatcggcctggcatcccccgacatgattcgctcatggtccttcggcgaggttaagaag
cctgagaccatcaactaccgtacgttcaagcccgagcgtgacggtcttttctgtgccaag
atcttcggcccgatcaaggactacgagtgcctgtgcggaaagtacaagcgtctcaagcac
cgtggtgtcatctgtgagaagtgtggcgtagaagtcgctctggccaacgtgcgtcgcgag
cgcatggggcacattgagcttgcgagcccggttgcccacatctggttcctcaagtctttg
ccgtctcgcattggtctgatgctggacatgaccctgcgcgacatcgagcgggtcctgtat
tttgaatccttcattgtgatcgagcctggtatgaccacgcttgagaagggccagttgctc
aatgatgagcagtattacgaagctctggaagagtttggtgacgaatttgacgcccgcatg
ggtgccgaagcggtcaaagaattgctggaaggcatcgacctgcaggccgaggttgacgcg
ctgcgggaagaaattccccagaccaattccgaaaccaagatcaagaagttcagcaagcgc
ctgaagattcttgaggcgttcctgcactccggcaaccgtccgggtgacatgatcatgacc
gttctgccggttctgccgcccgatctgcgcccgctggtgccgctcgacggcggtcgtttt
gcgacctccgatctgaacgatctgtaccgtcgggtgattaaccggaacaaccgtctcaag
cgtctgctcgaactgaacgcgccggacatcattgtccgtaacgagaagcggatgctgcag
gaagccgtggacgcactgctggacaacggccgtcgtggccgtgccattaccggcaccaac
aagcgcccgctgaagtccctggctgacatgatcaagggtaaacagggtcgcttccgtcag
aacctgttgggtaagcgggtcgactactccggtcgttcggtcatcgtggtcggtccttac
ctgcgtctgcaccagtgtggtctgccgaagaagatggcgctggaactgttcaagccgttt
attttctccaagcttgagcatcgcggcctggcgaccaccatcaaggccgccaagaagatg
gttgagcgcgaagagggcgtggtctgggatatcctggacgaggttattcgcgagcatccg
atcatgcttaaccgtgcgccgaccctgcaccgtctgggtattcaggcgttcgagccggtc
ctgatcgaaggcaaggccatccagctgcacccactggtgtgtgcggcctacaacgctgac
tttgatggtgaccagatggcggtacacgtaccgctgaccctggaagcccagctcgaagcc
cgtgcgttgatgatgtctaccaacaacgtgctgtctccggcgaacggcgagccgatcatc
gttccgtcccaggacgtggtattggggctttactacatgacccgggagcgtgaaagcgcg
ctgggtgaaggcatggtgttctctgatgtgaaagaggtacaccgggcctatggcgccggt
atggtcgatctgcaggccaaggtgaaagtgcgggtcaaggaagtcagcgttgcggaagac
ggggcccgtgaagagatcgtcagggtggtcgataccaccgttggccgttcgctgctgttt
gatatcgtgcctgacggtctgtcgttcgacctggtgaataagccgatggtcaagaaagcg
atctctggcctgatcaacacctgttaccgggacgcgggtctgaaggacacggttatcttt
gctgaccagctcatgtacatgggctatcactacgcgaccgtttccggtatctcgatctgc
ttcaacgatttcgaaatcccgcccgaaaagtacgagctggtggacgccgcgaccgacgaa
gttaaggacattgagaaccagtacgcgtccggtctcctgacccagggtgaaaagtacaac
aaggtcatcgatatctggtcgcgtgccaacgacaaagtttccaaagcgatgatggaacgc
ctgtctaaagagcaggtgattggtcctgacggcgagcctgtgaagggcgaggacggcgat
gacctgatgcaggaatcgtttaactcggtgtacatgatggccgactccggtgcccggggt
tctgcggctcagattcgtcagctcgcgggtatgcgtggtctgatggccaagccggacggc
tccatcatcgagacgccgatcactgcgaacttccgtgaaggtctgaacgtactccagtac
ttcatctcgacccacggtgctcgtaagggtctggcggataccgcattgaagaccgcgaac
tccggttacctgacccgtcgtctggttgatgtttcccaggacctggtggtgaccgaggaa
gactgcggtaccaccgaaggtctgctgatgacgccgcacatcgaaggcggtgacgtggtt
gttccgctgggtgatcgtgtccttggtcgtgtgaccgcgcgtgatgcgtacaccccgacc
gacaaggaaaacgcggttgtgccggttggcacactgttggacgagaagacgatcgaaacg
ctggagcgcgccggtgtggacgaggtctgggttcgctctgcgattacctgtgagactcgc
cacggcatctgctccaagtgttacgggcgcgatctggcccgcggccaccaggtcaacgtt
ggcgaggcggtgggtgttattgccgctcagtccatcggtgagccgggtacccagctgacc
atgcgtacgttccacattggtggtgcggcgagccgggcgtctgctgtcgacaacatccag
gtcaagcatggcgggacagttcgcctgcataacctcaagtcgatcgagaagtctgacgga
agcctggtggttgtgtctcgttcctccgcgctggccattgctgatgagcagggtcgtgag
cgtgagtggtacaagctgccatacggtgcggtgctgtcggtcaagaacggtgacgccgtc
gaagccggcgttgcggtggcgaagtgggacccccacacccacccgatcattgccgaggcc
gagggtatcgcgaagttcgtcaatatggagcagggcatcagtgtccgcacccagactgac
gagctgactggcctgtcgaccatggaagttatcgatcccaaggaccgccctgccgctggt
aaggatgttcgtccgggcatccagcttctggatgaggctggtaacgaagtggagttgcct
ggtggcgccaccgcgatgtacttcatgccggccaacgctctggtgacaatggcgaacggc
gccagggtcgagcttggtgatgtcgttgcgcgtattccgcaggaaagctccaagacccgg
gatatcaccgggggtctgccgcgggttgccgatctgttcgaagcccgtcgtccgaaggaa
tcgtcgatcctggctgagatcagcggtaccgtttccttcggcaaggaaaccaaaggcaag
aagcgcctggtgatcacgccgagagacggtgatgcgtacgaagttctgattccgaagcac
cgtcagctcaacgtcttcgaaggcgagacggttgaaaagggcgaggtgatttccgacggt
ccgtccaacccgcacgacattctgcgtctgctgggcgtggtcgagctggccaagtacatc
accaacgaaatccaggacgtctaccgtctgcagggtgttgtgatcaacgacaagcacatc
gaggtaattgttcgccagatgctgcgcaaggttgaggttacagacccaggcgacaccacg
ttgctgtccggtgaccaggtggaaattactcaggttctggaagaaaacgagaaagccgac
gcggccgacaaagagccggcgcgtttcgagcgtctgttgctgggtatcaccaaggcatca
ctggcgaccgaatcgttcatctctgcggcgtcgttccaggaaaccacgcgggtactcacc
gaaggtgcagttaccggtaagcgtgactacctgcgcggcctgaaagagaacgtggttgtt
ggtcgcttgatcccggccggtaccggtctggcctaccatagcgagcgccgtcgcaagcgc
gaactgggtgagcagggcgtaaccgcggcggatgtcgaagaagcgctcagtgctgagctt
aaccgcgaaagctga
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integrated database retrieval system
