Marinobacter salinisoli: LPB19_06420
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Entry
LPB19_06420 CDS
T09746
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msan
Marinobacter salinisoli
Pathway
msan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LPB19_06420 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msan03021
]
LPB19_06420 (rpoA)
03400 DNA repair and recombination proteins [BR:
msan03400
]
LPB19_06420 (rpoA)
Enzymes [BR:
msan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LPB19_06420 (rpoA)
Transcription machinery [BR:
msan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LPB19_06420 (rpoA)
DNA repair and recombination proteins [BR:
msan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LPB19_06420 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF22
Motif
Other DBs
NCBI-ProteinID:
QSP96021
UniProt:
A0ABX7MUJ8
LinkDB
All DBs
Position
1405066..1406070
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVHELLTPRTIDVKELSATRAKVTLEPLERGFGHTLGSALRRILLSSMPGCAITEAQ
IDGVLHEYSAIEGVQEDVIEILLNLKGVAVKLEGRDDVELTLNKKGPGVVTAGDIKLDHD
VEIANPEHEICHLSENGEVNMRLRVARGRGYEPADQRGLDEDETRAIGRLQLDATFSPVR
RVAYAVESARVEQRTDLDKLVIDLETNGTIDPEEAIRRAATILQQQLAVFVDFDHEKEPE
RVEEEEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLRGDDRVLGG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtacatgagttattgacacctcgtacgattgacgtgaaggagttgagt
gccacgcgtgccaaggtgacgcttgagcctctggaaagaggcttcggtcacaccctcggt
agcgcactgcgccgcattctcctgtcctcgatgccgggctgcgccatcactgaagcgcag
atcgacggtgtcttgcacgagtacagcgccattgaaggtgttcaggaggacgtcatcgag
attcttctgaatctcaagggcgttgccgttaagttggaaggtcgggacgacgttgagctg
acgctcaacaaaaagggcccgggtgttgtgactgccggcgatatcaagcttgaccacgat
gtcgagattgccaacccggagcatgagatctgtcacctgagtgagaacggtgaagtgaac
atgcgcctgcgtgttgcccgcggtcgcggctatgagccggctgatcaacggggtcttgac
gaggacgaaactcgcgcgattggacgcctgcagctggatgcgacattcagcccggttcgt
cgtgtggcttacgccgtggaaagtgcacgggtagagcagcgcaccgacctggacaagctg
gtaattgacctggagaccaatggcacgatcgatccggaagaagcaattcgccgggccgcg
accatcctccagcagcaattggcggtgtttgtcgatttcgatcatgagaaagagcctgag
cgagtagaggaagaggaagagatcgatccgattctgctgcgcccggtggatgatctggaa
ttgacagtgcgttcagctaactgcttgaaggcggaaaatatttactacatcggcgatctg
attcagcgcactgaagttgagctgctgaagacgcctaacctgggtaaaaagtcgctgacc
gagatcaaggacgttctggcgtcccgtggtttgtctctgggcatgcgtcttgataactgg
ccgccggcgagccttcgtggcgacgaccgggttctgggcggttaa
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