Marinobacter salinisoli: LPB19_10875
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Entry
LPB19_10875 CDS
T09746
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
msan
Marinobacter salinisoli
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msan03016
]
LPB19_10875
Enzymes [BR:
msan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LPB19_10875
Transfer RNA biogenesis [BR:
msan03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LPB19_10875
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DUF488-N3a
Motif
Other DBs
NCBI-ProteinID:
QSP93706
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All DBs
Position
2397427..2398578
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AA seq
383 aa
AA seq
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MVSTTAAVDLPPAPESILWLTSAEQLDQWLERVSGQPLALDTEFERVNTFYPVPGLVQLG
AGSDFYLVDPEVAENSARFRDVLADPAVPKLLYAMSEDLELFRHWLGVEPRGVIDLQIGA
AMAGEGFSVGYARLVEALFGETLDKSATRSDWLKRPLSEAQQRYAIEDIRFLEPLHRWVV
GHLQQRGLEQALKEESSRFAEEQSLLDNPARHYLKLRAGWTLNLSQQLVLRDLVLWREAQ
CQKLDRPRNRVLADSVLITIAEQMPTNQRALSSIEGLPAVVVRKYGDIFLELVNQDRDVA
MEPGFERIAPPLTREQQGLFKKVKQHFKKSAENADVPIELLAPRKRLEKVIQDGTIAKQD
FFQGWRAEILAPLRGDIEELLRS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccaccactgcggccgttgacctgcctccggcccccgagagcattctttggctg
acctccgccgagcaactggatcaatggctcgagcgggtgtccggccaacccctggcactc
gatacggagtttgagcgggttaacaccttttaccccgtgcctggacttgtccagctcggt
gcaggctcggatttttatctcgtggacccggaagtggcggagaactcggcacgcttccgt
gacgtgcttgccgatcccgcagtgcccaaactgctctacgccatgagcgaagatctggag
ttgtttcgtcattggcttggcgtggagccgcgtggtgtcatcgatttgcagattggtgcg
gccatggctggtgaggggttctctgtgggctatgcccggttagttgaggcgttgtttgga
gagacgctggataaatcggcaacacgttcggactggctcaaacgcccgttgtccgaggcc
cagcagcgttatgccattgaagacatccgcttccttgagccgttgcatcgatgggtggtc
ggtcacctgcagcagaggggtttggaacaggcattgaaggaggaatcctcgcgttttgcc
gaggagcagtcgctcctggacaatccggcccggcactatctgaagctgcgcgccggctgg
acgcttaatctgtcgcagcagcttgtgctcagggatctggtcctgtggcgggaggcacag
tgtcagaaactggatcgacctcgaaaccgggtgctggcggactcggtgctgatcacgatt
gccgagcaaatgccgacgaaccagcgggcgctctcaagcatcgaggggttaccggcggtg
gtggtgcgaaaatacggggacattttcctggagctggtgaatcaggaccgggatgtggca
atggagccgggctttgaacgtatcgctccgccactcacacgggaacagcagggattgttc
aagaaagttaaacaacatttcaaaaagtcggcagaaaatgcggatgttccgatcgaactc
ctggcgcccagaaaacggctggaaaaagtgatacaggacgggaccatcgcaaagcaggac
tttttccagggctggcgcgcagagatcctggcgccgctccggggagatatcgaggaatta
ctaagatcatga
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