Marinobacter salinisoli: LPB19_11370
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Entry
LPB19_11370 CDS
T09746
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msan
Marinobacter salinisoli
Pathway
msan03420
Nucleotide excision repair
msan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB19_11370
03430 Mismatch repair
LPB19_11370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msan03400
]
LPB19_11370
Enzymes [BR:
msan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB19_11370
DNA repair and recombination proteins [BR:
msan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB19_11370
MMR (mismatch excision repair)
Other MMR factors
LPB19_11370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
AAA_19
UvrD_C
UvrD_C_2
Cas_Cas4
AAA_30
AAA_11
AAA_12
DEAD
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QSP93795
LinkDB
All DBs
Position
2512725..2515634
Genome browser
AA seq
969 aa
AA seq
DB search
MTTGAAHLQSKANPEQLKAILATDGPVLIIAGPGSGKTFTLVERIVYLITEKGVEPESLL
VVTFTDKAARELTTRISNRLAELGIQFNLNEMYLGTFHSICLRLLEDYREFTRLKRSFTL
FDQFDQQYFLYQRIKDFREMPDAHLVMGEDQKGRWAQSESLLKWLNKVSEEALDAATLAA
ASEPEIRVLAACFSKYLDLLNENNSLDFSGIQYEALQLLERHPEVLVQLREKLTHLMVDE
YQDTNTIQERILLLLAGEHQNLCVVGDDDQGLYRFRGATIRNILEFPTLFGEGRCKQVKL
TVNYRSHPDIIRFYTEWMKEQVWDDGTRVFRFPKQILPREDDFTEQPTAVRLAAGDDDGG
NTNWNAEVLAFLNGLKDSGQVADWNQVAFLFRSVKSDKAVALARFLEAQGVPVYSPRSNM
FFEREEIRLMIGALIFLFPQFPKVRAWVEGVTLPIWDYYDHQCFKPFTDELRKPENKPLL
DWARPLAKRHAVLAQNTDYSFSGLFYQLLQFPLFSRFLSEEVLQGVDKGRAARNLGTFSK
LLTKFEYLHYVSVLNPEFLEKNLRDFFNQFLRFLLSGGIGEYEDEAEYAPKGCVSFLTIH
QSKGLEFPVVVCGSLEAVPRKQYSTLDVMLEDGGYLSKERFEPLEHIKRFDFWRLFYTAF
SRAQNLLVLAAQEKQGQGRSPSKYFQRLFYELPNWRDIDLSGLTFEAVKQINLKREYSFT
SHITVFENCAEQYRFFKELEFAPVRESPMLFGTLVHQTIEDIHKSVLRGEEGKLSLDAIE
GWFSANYAMLSKKERVYLAPSSQRAALLHVLRYYERENGNWDRIKEAEVDISLVKDQYIL
KGSVDLIRGENNTVEIIDFKSEKKPDMEKDRERLRQYQHQLEVYAHLVEERTGQRVSRMH
LYYTGEDGGNPYVSFSKDDRAIGNTIARFDDIVARIESQDYQIETRPTKLCQSCDMRGYC
DNKNWNFRN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgactaccggtgctgctcaccttcagtccaaagccaaccctgagcagctaaaagctatc
ctggctacagacggcccggtgctaatcattgcggggccgggatcgggtaaaaccttcacg
ctagtcgagcgcattgtctatttaataaccgaaaaaggggtcgagcccgagtcgctgcta
gttgtcacgtttaccgacaaggctgcacgagagttgaccacccgtatctcgaatcggtta
gccgagctgggcattcagttcaatttgaacgaaatgtaccttggtaccttccattcgatc
tgtctgcggttgctggaagattatcgtgagttcacgcggctaaagcggagcttcacgcta
tttgaccagttcgaccaacagtacttcctttaccagcgcattaaggactttcgtgagatg
cccgatgcccatttagtaatgggtgaagaccagaaggggcgctgggcacagtcggagagc
ttacttaagtggcttaataaagtcagcgaagaggcgctcgatgcagcaacactggcggcg
gcgtcagagccagaaattcgcgtccttgcggcgtgcttcagtaagtacctggatcttctg
aacgagaacaactcgctcgacttctccggtattcaatacgaagcactgcagctgctagaa
aggcaccccgaagtgttggtgcaattgcgtgaaaagcttacacatctgatggtggacgag
taccaagataccaacaccatacaggaacgcattcttctgttactcgcaggcgagcaccaa
aatttgtgcgtggtaggggatgacgatcagggcctataccgctttcgtggggccaccatt
cgcaacattttggagttccctacgctattcggtgagggtcgatgtaagcaggttaaactt
actgtcaattaccgctcgcacccagacatcatccgcttctacaccgagtggatgaaggag
caggtttgggacgatggtacccgcgtgtttcgctttcccaagcagatcttgccgcgagag
gacgattttacagagcagcccacggcagtccgcttggcagccggtgatgatgatgggggc
aacacaaactggaacgccgaggttctcgcgttcctcaatggtttgaaggactcaggtcag
gtcgcggactggaatcaggtggcgttcctttttcgctcggttaaaagtgacaaggcagtg
gcgctggcgcgttttctcgaagcacaaggggtgccggtctattcgcctcgttcgaacatg
ttcttcgagcgtgaagaaatccgtttgatgatcggtgcgctgattttcctattcccgcag
tttccaaaggtgagggcgtgggtcgaaggcgttacgctgccaatttgggactactacgac
caccagtgtttcaagccgttcaccgacgaattgcggaagccggagaacaaaccattgctg
gattgggcgcggccattggccaagcgtcacgccgtgctagcacagaacactgactactcg
ttctcgggcttgttttaccagctactgcaattccctctgttttcgcgttttcttagtgaa
gaagtattgcagggggttgataagggacgtgcagcgagaaacctcggcactttttccaag
ttgctgactaaattcgagtacctacactatgtcagcgtactcaacccggaatttctggaa
aaaaatctacgtgactttttcaaccaattcctacgctttctcctgagcggtggtatcggc
gaatacgaggacgaggcagagtacgcgcccaagggctgcgtctcgtttcttaccattcat
cagtccaaagggctggagttcccggtggtggtttgcggctcgctggaagcggtaccgcgc
aagcaatacagcaccctggatgtgatgctggaagacggtggctacctctctaaagagcgt
tttgagccactcgaacatatcaaaaggttcgatttctggcggctgttctacaccgctttc
tctcgcgcccagaatcttctagtgcttgctgcgcaggaaaagcaaggtcaggggaggtcg
ccctccaaatatttccagcgcctgttttacgagcttccgaactggcgcgacattgatctc
tcagggctgaccttcgaagcggtgaagcagatcaacctcaaacgcgaatattcattcaca
tcgcacattacggtgttcgagaactgcgccgagcagtaccggttcttcaaggagcttgaa
ttcgcacctgttcgcgaaagtccgatgctgttcggcaccttggtgcaccagactatcgag
gacatccacaagagcgtcttgcggggtgaagagggaaagctttctttagacgccattgaa
ggttggttctcggcaaactacgccatgctctcgaagaaggagcgcgtataccttgctcct
tcttcgcagcgggcggcgttgctgcacgtattgcgctattacgagcgcgagaatggaaat
tgggatcgcatcaaggaggccgaggtcgatatttcgcttgtcaaggatcagtacatattg
aagggcagtgtcgacttgatccgcggcgaaaacaatacggtcgaaatcatcgacttcaag
tctgagaagaagccggatatggagaaggatcgggagcggctgcgccaatatcagcaccag
cttgaggtctatgcccatctggtggaagagcgtacgggccagcgggttagccgaatgcat
ctttactatacgggcgaagacggtggtaacccttacgtctccttttcaaaggatgaccgg
gccatcgggaatactatcgcgcgctttgatgacatcgtggcacgtatcgagagccaggat
taccagatcgaaacacgccctacaaaactgtgtcagagctgcgacatgcgtggctactgc
gacaacaagaattggaacttcaggaattga
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