Marinobacter salinisoli: LPB19_12795
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Entry
LPB19_12795 CDS
T09746
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msan
Marinobacter salinisoli
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msan03032
]
LPB19_12795 (topA)
03400 DNA repair and recombination proteins [BR:
msan03400
]
LPB19_12795 (topA)
Enzymes [BR:
msan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LPB19_12795 (topA)
DNA replication proteins [BR:
msan03032
]
Prokaryotic type
DNA Topoisomerases
LPB19_12795 (topA)
DNA repair and recombination proteins [BR:
msan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LPB19_12795 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_TFIIB
DUF2399
Toprim_4
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QSP94066
LinkDB
All DBs
Position
complement(2814069..2816702)
Genome browser
AA seq
877 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSDFIVKSSVGHIRDLPVSGGGSQTDPKERARQAALTRK
MSPEEKAAHKKRKAREQLVARMGVDPDQDWSARYEILPGKEKVVSELKRLAKSAEHVYLA
TDLDREGEAIAWHLQQTIGGEPDKYRRVVFNEITKRAIKEAFKDPGTVDVNRVNAQQARR
FLDRVVGYMVSPLLWAKIARGLSAGRVQSVAVRLIVEREKEIRKFVPEEFWQMHADLAPG
QGNRPVRFEVTKYADKTYRPVNEAESKEHLERLKAGAFRVAKREDKPTRSRPSAPFITST
LQQAASNRMGFSVKKTMMLAQRLYEAGFITYMRTDSTNLSQDAVAGCREYIKDQFGDRYL
PEKPRVYGSKEGAQEAHEAIRPTDVSRRSSDISGLEKDAEKLYELIWRQFVACQMADAEF
LSTSIMVANGEYELRTRGRIIKFDGFLKAAPQAKKEEDVALPDIRVDEVLGLEKLDPSQH
FTKPAPRYTEASLVKELEKQGIGRPSTYASIISTIQDRGYVRLESRRFYAEKMGEIVNER
LSESFPNLMDYDFTARMEDELDEIAEGDVDWKKVLNDFYGKFRSQLETAESSDEGSMRAN
TPTETDIPCPSCGRNMQIRVASTGVFLGCSGYALPPKERCKTTINLVSGDEVVGADDDVE
GEGETRLLRMKRRCPKCGTAMDSYLVDEGRKLHICGNNPDCSGYEVEKGTFRIKGYDGPT
LECDKCGSEMQLKTGRFGKYFGCTNDDCKNTRKLLKNGEPAPPKMDPVPMPELQCQKVDD
TYVLRDGASGLFLAASKFPKNRETRPPLVKEILPHKNEVDPKYAFLFEAPAADPEGNPTV
IRYSRKMKEQYVMSEKDGKATGWTAHYRDGKWVPKSK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagtctcgtaattgtcgagtcaccagcgaaagcgaagaccatcaacaagtac
ctgggctcagatttcattgttaagtcgagtgtgggccatattcgggatcttcctgtcagt
ggcggtggttcccagacagaccccaaggaacgagcccggcaagctgcgctgacccgaaaa
atgagccccgaagaaaaagcggcccataaaaagcgtaaggcccgagagcagctggtggcc
cgcatgggtgtggaccctgatcaggattggtcggcgcgttacgagattcttcccggcaag
gaaaaagtcgtcagtgagctcaagcgtctggccaaatccgccgagcacgtctacctcgcg
acggatttggaccgcgagggggaagccatcgcgtggcacctgcaacaaacgatcggtggt
gaacctgacaagtaccggcgggtggtgttcaacgaaattaccaagcgcgcaatcaaggaa
gccttcaaggatcccggaaccgttgatgtgaaccgggtgaatgcgcagcaggcccgtcga
ttcctcgaccgggtggttggttacatggtttcgccgctactctgggcaaaaatagcccga
ggcctgtctgccggccgggtacagtcggtggcggtacgcttgattgtagagcgcgaaaaa
gagatccggaaattcgtcccggaagaattctggcagatgcatgctgacttggcgcccggg
caaggaaaccggccggtccgctttgaagtcaccaagtacgccgataaaacctaccgaccg
gtcaacgaagccgagagcaaagaacatctggagcggctcaaggctggggcgttcagggtt
gccaagcgagaagacaagccgacgcgctcccgtccatcggcaccgtttatcacctcgacg
ttgcagcaggccgccagtaaccgtatgggcttcagcgtcaagaagacgatgatgctggca
caacggctttacgaagcgggtttcatcacttacatgcgtactgattcgaccaatctgagt
caggatgcggtggcaggctgccgggaatatatcaaagatcagttcggtgaccgttatctg
ccggaaaagccccgggtctatggcagcaaagaaggagctcaggaagctcacgaagctatt
cgtccgaccgatgtcagccggcgctcctccgatatcagtggtcttgaaaaggacgctgag
aagctctacgagctgatctggcgacagttcgttgcctgccagatggccgatgctgagttt
ctcagtacatccatcatggtggctaacggcgaatacgaactccgtacccgcggccggatc
atcaagtttgatggtttcctgaaggctgctccgcaggccaagaaagaagaagacgtcgcg
cttccggacattcgggtggatgaggttcttggcctcgaaaagctggacccgagccagcat
ttcaccaaacccgcgccacgctatacggaagcgagcctggtcaaggagctggagaagcag
ggtattggtcggccgtcgacctatgcgtctattatctcgaccattcaggaccgcggttat
gtccggctagagagtcggcgcttctatgctgaaaagatgggcgagatcgtcaacgagcgc
ttgtcggaatccttcccgaacctcatggattacgacttcacggcacgcatggaagacgag
ctggatgagattgctgagggcgatgtggactggaagaaagtcctgaacgacttctacggc
aaattccgttcccagctggaaaccgcggaaagctcggatgaaggcagtatgcgggccaac
acccccaccgaaacggatattccgtgtccaagctgcggccgcaacatgcagattcgcgtc
gccagcaccggtgtgttcctgggatgttccgggtatgcgttaccgccaaaagaacgctgc
aagaccaccatcaacctggtgtcgggcgacgaggtggtcggagccgacgacgatgtagag
ggcgagggtgaaactcgcctgctgcgcatgaagcgtcggtgcccgaaatgcggaaccgcc
atggatagctatctggtggacgagggccgcaagttacatatttgcggtaataacccggac
tgctccggttacgaggtggagaagggtacgttccggatcaaaggctacgacggccccacg
cttgagtgtgataagtgtgggtccgagatgcagctcaagacggggcgctttggtaaatac
ttcggttgcaccaacgacgattgcaagaatacgcgcaaactgctcaaaaatggcgagccc
gcaccgcctaagatggacccggtgccaatgcccgaactgcagtgtcagaaggttgacgat
acctatgtgctcagggatggtgcttccggcctattcctggcggcgagcaagtttcccaag
aaccgggaaacccgtccgccactggtaaaggaaattctgccgcacaagaacgaagttgat
ccgaagtacgccttccttttcgaggcgcctgcagcggatcctgagggtaatccaacggtg
attcgttacagtcggaagatgaaagagcagtatgtgatgtccgaaaaggatggcaaggcc
accggctggacggctcattatcgcgacggcaagtgggtgccgaaaagcaaatga
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