KEGG   Marinobacter salinisoli: LPB19_15335
Entry
LPB19_15335       CDS       T09746                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
msan  Marinobacter salinisoli
Pathway
msan02020  Two-component system
msan02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:msan00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LPB19_15335
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LPB19_15335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msan03021]
    LPB19_15335
Transcription machinery [BR:msan03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LPB19_15335
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: QSP96591
UniProt: A0ABX7MW72
LinkDB
Position
3362144..3363673
AA seq 509 aa
MKASLQLKLGQSLTMTPQLQQAIRLLQLSTLDLQQEIQQALESNPMLETSEDDDNQPDTT
SDDAEKAESSAESEVTGDAAPDPEQDWDEPDTGPDWSTENDAPDNIPDDLPVDTAWDDIY
QSAPASAARNDDENDHDFETRNSPTETLHDHLLWQLNLTPLSERDAAVAHALLDAVDDRG
YLTSPLEEIHAGLMDEQDEDPLELDEVEAVLHRLQHFDPSGVFARDLQECLLIQLNQLPP
ETPWLPQARLVITHYINLLGNRDYAQLLRRSRLKEDQLRDVLALITNLNPRPGDVIDQAE
PDYVIPDVIVRKHNGRWRVELNPEIAPRIRVNASYASLIKRADSSADNTYLRDQLQEAKW
FIKSLQSRNETLLKVATRIVEHQQGFLDQGEEAMKPLILSDIAQAVEMHESTISRVTTQK
YMHTPRGIFELKYFFSSHVSTDEGGECSSTAIRAMIKKLIAAETPKKPLSDSKIAAMLGE
QGIRVARRTVAKYREAMHIPPSNERKRLV
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgaaagcctctttacagttaaagctgggtcaaagcctgacgatgaccccccagcttcaa
caggcgatccggctactgcagctatctaccctcgatctccaacaagagatccagcaggca
ctggaatccaacccaatgctggaaacgtcggaagacgacgacaaccagccagacaccacc
agtgacgacgctgaaaaggccgagagctccgctgagagcgaagtaaccggagacgccgcg
ccagaccccgagcaagattgggacgaaccggataccggccccgactggtccaccgagaat
gacgcaccggacaacattcccgacgatctcccggtagacacagcctgggacgacatctat
caatcagcaccggcgtcggccgctcgtaacgatgacgaaaatgatcacgacttcgagacc
cggaattcaccgactgagaccctgcacgatcacctgctgtggcagctgaacctgacccct
ctcagtgaacgagacgcagctgttgcccatgccctgctggatgcggtcgatgatcgtggc
tatctgaccagcccgctggaagaaatccacgccggcctgatggatgagcaggacgaggat
ccgctggaactcgacgaagtggaggcggtactgcaccgtctgcagcatttcgatccgtca
ggcgtatttgcccgggatttgcaggaatgcctgcttatccagctgaaccagttaccaccg
gaaaccccttggctgccgcaggcaagactggttattacccactacattaacctgctgggc
aaccgtgattacgcgcaactgcttcgccggagccggctgaaagaagaccagcttcgtgac
gtgctcgccctgatcacgaatctcaacccgcgtccgggtgatgttatcgatcaggcggaa
cccgattacgtgattcccgatgtaattgtccggaaacacaatggccgctggcgggttgag
ctaaaccccgagattgcaccgcgcatccgcgtcaatgcgagctatgcttcattaataaag
cgggcggacagcagcgccgacaatacctatctcagagatcagctgcaggaagccaagtgg
ttcatcaaaagtctgcaaagcagaaacgaaacgctgctgaaggtggctacgcgcatcgtc
gagcaccagcaggggtttctggatcagggcgaagaggcgatgaaaccgctcatcctgtcc
gatattgcgcaggcggtggaaatgcatgaatcgacgatctcccgggtgaccacgcagaaa
tacatgcacactccccggggtattttcgagctgaagtattttttctcgagccacgtcagt
acagacgaaggcggggagtgttcttcgacggccatccgtgcaatgatcaagaaactgatc
gcagcggaaacaccaaaaaagccgttgagcgacagcaaaattgcggccatgctaggagaa
cagggcatcagggtggcgcgacgcacggtagccaaataccgggaagccatgcacattccg
ccatccaacgaacgaaaaagactggtttag

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