Marinobacter salinisoli: LPB19_15335
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Entry
LPB19_15335 CDS
T09746
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
msan
Marinobacter salinisoli
Pathway
msan02020
Two-component system
msan02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LPB19_15335
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LPB19_15335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msan03021
]
LPB19_15335
Transcription machinery [BR:
msan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LPB19_15335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
QSP96591
UniProt:
A0ABX7MW72
LinkDB
All DBs
Position
3362144..3363673
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AA seq
509 aa
AA seq
DB search
MKASLQLKLGQSLTMTPQLQQAIRLLQLSTLDLQQEIQQALESNPMLETSEDDDNQPDTT
SDDAEKAESSAESEVTGDAAPDPEQDWDEPDTGPDWSTENDAPDNIPDDLPVDTAWDDIY
QSAPASAARNDDENDHDFETRNSPTETLHDHLLWQLNLTPLSERDAAVAHALLDAVDDRG
YLTSPLEEIHAGLMDEQDEDPLELDEVEAVLHRLQHFDPSGVFARDLQECLLIQLNQLPP
ETPWLPQARLVITHYINLLGNRDYAQLLRRSRLKEDQLRDVLALITNLNPRPGDVIDQAE
PDYVIPDVIVRKHNGRWRVELNPEIAPRIRVNASYASLIKRADSSADNTYLRDQLQEAKW
FIKSLQSRNETLLKVATRIVEHQQGFLDQGEEAMKPLILSDIAQAVEMHESTISRVTTQK
YMHTPRGIFELKYFFSSHVSTDEGGECSSTAIRAMIKKLIAAETPKKPLSDSKIAAMLGE
QGIRVARRTVAKYREAMHIPPSNERKRLV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcctctttacagttaaagctgggtcaaagcctgacgatgaccccccagcttcaa
caggcgatccggctactgcagctatctaccctcgatctccaacaagagatccagcaggca
ctggaatccaacccaatgctggaaacgtcggaagacgacgacaaccagccagacaccacc
agtgacgacgctgaaaaggccgagagctccgctgagagcgaagtaaccggagacgccgcg
ccagaccccgagcaagattgggacgaaccggataccggccccgactggtccaccgagaat
gacgcaccggacaacattcccgacgatctcccggtagacacagcctgggacgacatctat
caatcagcaccggcgtcggccgctcgtaacgatgacgaaaatgatcacgacttcgagacc
cggaattcaccgactgagaccctgcacgatcacctgctgtggcagctgaacctgacccct
ctcagtgaacgagacgcagctgttgcccatgccctgctggatgcggtcgatgatcgtggc
tatctgaccagcccgctggaagaaatccacgccggcctgatggatgagcaggacgaggat
ccgctggaactcgacgaagtggaggcggtactgcaccgtctgcagcatttcgatccgtca
ggcgtatttgcccgggatttgcaggaatgcctgcttatccagctgaaccagttaccaccg
gaaaccccttggctgccgcaggcaagactggttattacccactacattaacctgctgggc
aaccgtgattacgcgcaactgcttcgccggagccggctgaaagaagaccagcttcgtgac
gtgctcgccctgatcacgaatctcaacccgcgtccgggtgatgttatcgatcaggcggaa
cccgattacgtgattcccgatgtaattgtccggaaacacaatggccgctggcgggttgag
ctaaaccccgagattgcaccgcgcatccgcgtcaatgcgagctatgcttcattaataaag
cgggcggacagcagcgccgacaatacctatctcagagatcagctgcaggaagccaagtgg
ttcatcaaaagtctgcaaagcagaaacgaaacgctgctgaaggtggctacgcgcatcgtc
gagcaccagcaggggtttctggatcagggcgaagaggcgatgaaaccgctcatcctgtcc
gatattgcgcaggcggtggaaatgcatgaatcgacgatctcccgggtgaccacgcagaaa
tacatgcacactccccggggtattttcgagctgaagtattttttctcgagccacgtcagt
acagacgaaggcggggagtgttcttcgacggccatccgtgcaatgatcaagaaactgatc
gcagcggaaacaccaaaaaagccgttgagcgacagcaaaattgcggccatgctaggagaa
cagggcatcagggtggcgcgacgcacggtagccaaataccgggaagccatgcacattccg
ccatccaacgaacgaaaaagactggtttag
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