Marinobacter salinisoli: LPB19_15420
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Entry
LPB19_15420 CDS
T09746
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
msan
Marinobacter salinisoli
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msan03009
]
LPB19_15420 (rimO)
Enzymes [BR:
msan01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LPB19_15420 (rimO)
Ribosome biogenesis [BR:
msan03009
]
Prokaryotic type
ribosomal protein modification factors
LPB19_15420 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QSP94544
LinkDB
All DBs
Position
complement(3380635..3381981)
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AA seq
448 aa
AA seq
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MTDKTRDAAVGSGKVGFISLGCPKALVDSERILTQLRQDGYEVVPSYDDADVVVVNTCGF
IDSAKQESLDAIGEAMAENGKVIVTGCMGVEADRIRDTHPGVLAVSGPHAYEEVVGAVHE
YVPPKKEHDPFTDLVPPQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDV
MDEAKRLVDAGVKELLVISQDTSAYGVDIKYRTGFWQGRPLKTKMQALCEALGELGVWVR
LHYVYPYPHVDDVIPLMAEGKILPYLDIPFQHASPKVLKAMKRPAHDSKTLDRIRKWREI
CPQLTIRSTFIVGFPGETEEDFQYLLDWLEEAQLDRVGAFKYSPVEGAKANEIDGAVPEE
VKEERLERFMAKQAEISAARLQAKIGATIDVLIDEVDEEGAIGRSKADAPEIDGMVYLND
ETDLVPGQIVKAVVEHADEHDLWASLAR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaaaactcgtgatgccgctgttggaagcggtaaggtgggcttcatcagcctt
ggatgcccgaaagcattggtggattcagagcgcatcctgacgcagcttcgccaggacgga
tatgaggtggtgccttcctacgacgatgccgatgtggtggtcgtgaacacctgcggcttt
atcgattccgccaagcaggagtcgcttgatgctatcggtgaagcgatggccgagaacggc
aaggtcattgtcaccggttgcatgggggtggaggcggatcgaatccgcgacacgcatccg
ggggttctcgccgtctccggaccccatgcctatgaggaggtggttggagccgtccacgag
tacgttcctccaaaaaaagagcacgacccgtttacagacctggtaccgcctcagggtgtg
aagctgaccccgcggcactacgcctatctgaagatttccgagggctgcaatcaccgctgt
accttctgcatcataccgtccatgcgcggcgacctggtgagccgccccatcggtgatgtc
atggatgaagccaagcggctggtggatgccggggtcaaggaattgctggtgatttctcag
gacacctcggcctatggggtggatatcaaataccgcaccggtttctggcaggggcggccg
ctcaaaaccaagatgcaggcgttgtgcgaggcgctcggagagttgggggtctgggtgcgg
cttcattatgtgtatccctacccgcatgtggatgacgtgattccactgatggcggaagga
aagatcctgccgtacctggatatcccgttccagcacgccagcccgaaggtgctcaaggcc
atgaagcggcctgcgcacgatagcaagaccctggaccgcatccggaagtggcgggaaatc
tgcccacagctcaccatccgctccactttcatcgtcggcttccccggcgaaacggaagaa
gattttcagtatttgctggactggctggaggaggcgcagttggatcgggtgggtgccttc
aagtacagccctgtcgagggtgccaaggcgaacgagattgacggtgcggttcctgaagag
gtcaaagaggagcgtttggagcgctttatggccaagcaggcggagatttccgccgcacgg
cttcaggccaagatcggggcgaccatcgatgtgctgattgatgaggttgatgaagaaggc
gccatcggacgctccaaagcggatgcgccggaaatcgatggcatggtgtacctaaatgac
gaaaccgatctggtgccggggcaaatcgtgaaagcggtggttgagcatgccgacgagcac
gatctgtgggcgagccttgcccggtaa
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