Marinobacter salinisoli: LPB19_15490
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Entry
LPB19_15490 CDS
T09746
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
msan
Marinobacter salinisoli
Pathway
msan03030
DNA replication
msan03430
Mismatch repair
msan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB19_15490 (holA)
03430 Mismatch repair
LPB19_15490 (holA)
03440 Homologous recombination
LPB19_15490 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msan03032
]
LPB19_15490 (holA)
03400 DNA repair and recombination proteins [BR:
msan03400
]
LPB19_15490 (holA)
Enzymes [BR:
msan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB19_15490 (holA)
DNA replication proteins [BR:
msan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB19_15490 (holA)
DNA repair and recombination proteins [BR:
msan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB19_15490 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delt_C
HP_1247_M
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
QSP94555
UniProt:
A0ABX7MQF9
LinkDB
All DBs
Position
3396592..3397599
Genome browser
AA seq
335 aa
AA seq
DB search
MKTQTAQLPQLLKKGLAPVYLISGDEPLLVQECCDQIRQAARDAGFHDRLTFHADHQLDW
STVADEFNAMSLFAERRRIEIHLPNGKLGKGKDALERYLEAPTDDIILLLISTRLDAAET
RRKWYKSLQNKGVHVPVWPVDAEKFQGWLKQRASRQGLHLTQGALSMLAERLEGNLLAAS
QEMDRLQLLTKGETIDEATVEQAVLDSSRFNGFELATELLAGRAPHAGKMIGVLQQEGEN
PLGMLTVLSRDLNLILELKSVASQGDAPSAFLKKRGVFQPQRARVIEQAARRLNTPQLHQ
ALEICTQIDRAAKGFGDLSPWHYLRDLSVHLAQRN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgcagaccgcacaacttccacaactgctgaagaaagggctcgcgccggtgtac
ctcatttccggcgatgaacctctgctggtccaggagtgctgcgaccagattcgccaggcc
gccagggacgcaggcttccacgaccggctcacctttcacgccgatcaccagttggactgg
agcaccgttgccgacgaattcaatgccatgtcgctgttcgcagaacgccgacggattgag
attcacttgcccaacggaaaactcggcaagggcaaagacgcactggaacgctatctggaa
gcccccaccgacgacataatcctactgctgatcagcacccggctggacgctgcagagacg
cgccgaaagtggtacaaatcactgcaaaacaaaggcgttcacgtgccggtctggccagtc
gatgccgaaaagttccaaggctggttaaagcaaagagccagccgccagggcctgcacctt
acccaaggcgccctttccatgctggccgagcgactggaaggcaacctgctggctgccagc
caagagatggatcgcctgcaactgctcaccaaaggcgaaaccattgacgaggcaacggtg
gagcaagccgtactggacagctctcgcttcaacggtttcgaactggcaaccgaactgctt
gcgggtcgtgcgccccatgccggcaaaatgatcggcgtactccagcaggagggcgaaaat
cctctcggcatgctgaccgtgctcagccgcgatctcaaccttatccttgaactgaaaagc
gtcgccagccagggcgatgcgccttccgcttttctgaaaaagcgcggcgtcttccagcct
caacgggcccgggtaatcgaacaggcagcccggcgcctgaataccccccaacttcaccag
gcactcgaaatctgcactcagatcgatcgcgccgccaagggattcggcgacctctctccc
tggcattacctgcgcgatctttcggtccacctcgcccagcgtaactga
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