Marinobacter salinisoli: LPB19_16915
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Entry
LPB19_16915 CDS
T09746
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
msan
Marinobacter salinisoli
Brite
KEGG Orthology (KO) [BR:
msan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msan03400
]
LPB19_16915
DNA repair and recombination proteins [BR:
msan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
LPB19_16915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_22
AAA_30
SLFN-g3_helicase
AAA
DUF7577
AAA_16
zf-tcix
DZR
Zn_ribbon_3
zf-4CXXC_R1
Zn_Ribbon_1
T1R_D3-like
CobA_CobO_BtuR
SNF2-rel_dom
Prot_inhib_II
Motif
Other DBs
NCBI-ProteinID:
QSP94826
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Position
complement(3690672..3692441)
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AA seq
589 aa
AA seq
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MNGSFKLRPYQQEAVDATLRHFRQSDESAVIVLPTGAGKSLVIAELARLARRKILVLTHV
KELVEQNHAKYESYGLAGGIFSAGLKRKESQHQVTFASVQSVAANLDQFRDEYSLVIIDE
CHRVSGEDTSQYQRIIELLRQQNDALKVLGLTATPYRLAMGWIYRYHYRGFVRGSSEDDK
PFVHCIYELPLSYMINRGYLTKPELVNAAVAQYDFSALAQDRFGEYAEKDVNQLLSKHKR
VTRAIVEQVMELAAERQGVMIFAATVDHAREITGYLPEQQTALVTGATDQKDRDQLIQRF
KQRQLKYLANVSVLTTGFDAPHVDFIAILRPTQSVSLYQQIVGRGLRLDDGKQDCLVIDY
AGNSVNLHHPEVGEPKPSPDSEPVQVFCPGCGFANIFWGKTDSDGRVIEHYGRRCQGLLE
PAEEEGAAGLRPEQCDYRFRFKECPHCGAENDIAARNCHQCRQAIIDPDDQLRDALKLKD
AMVIRCAGITLSVAGSKLKITYHGEDGEELSESFDFSKPAQRAVFNKLFGRRFANSQAPK
TFNKAEEVLELQALLPAPDFVIARKQKHYWQVQERMFDYQGSYRMANEA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaatggttctttcaaacttcgcccctaccaacaggaagcggtcgatgccacgctcagg
cacttccgccaatccgatgagtctgccgtcatcgtgctgcccaccggcgcgggcaagagc
ctggtcatcgccgagctggcccgtcttgcccggcgcaaaattctggtgctgacccacgtc
aaggaactggtggagcagaaccacgccaaatacgagagctatgggttagccggcggcatt
ttctccgccgggctgaagcgcaaggaaagccagcatcaggtcacctttgccagtgtgcag
tccgtggcggcgaatctggatcagttccgggatgaatactcgctggtgatcatcgatgag
tgccatcgggtcagtggtgaagacaccagccagtaccagcggatcatcgagctgctgcgg
caacagaacgacgccctcaaagtgctggggctcaccgccacgccctatcgcctggccatg
ggctggatctatcgctatcactaccggggctttgttcgcggttctagcgaagacgataag
ccttttgtgcactgcatatacgaactgccgctgagctacatgatcaaccggggctatctc
accaaacccgagttggtgaacgcggcggtggcgcaatacgatttctccgcgctggctcag
gaccgctttggtgaatacgccgagaaagacgtcaaccagctgcttagcaaacacaagcgg
gtgacccgcgccatcgttgaacaggtgatggaactggccgcagagcgccagggggtgatg
atctttgcggcgacggtggatcacgcccgggagatcaccggctatctgccggaacagcaa
accgcgctggtgaccggcgccaccgatcagaaggatcgggaccagctgatccagcgcttc
aagcagcggcagttgaagtatctggcgaatgtgtccgtgcttaccaccggctttgatgcg
ccccacgtggactttatcgccattcttcgccccacccagtcggtcagcctgtatcagcag
attgtgggccgtggccttcgcctcgacgacggcaagcaggattgcctggtgattgattac
gcgggcaacagcgtgaacctgcatcacccggaagtgggggagccgaaaccaagcccggac
agcgagccggtgcaggtgttctgtccgggctgtggctttgccaacatcttctggggcaaa
accgacagcgatggccgggtgatcgaacactacgggcgccgttgccagggcctgctggag
cctgcggaagaggagggagcggcagggctgcgcccggaacagtgcgattaccgtttccgg
ttcaaggagtgcccccactgtggggccgagaacgatatcgcggcccgcaactgccaccag
tgtcgccaagccattatcgacccggatgatcagctgcgtgatgccctgaaactcaaggat
gccatggtgatccgctgcgccggcatcacgttaagtgtcgccggcagcaagctgaaaatc
acctaccacggcgaggacggggaagaactcagcgagtcctttgatttcagcaagccggca
cagcgtgccgtgttcaataaactgttcgggcgtcgtttcgccaatagccaggcgccgaaa
acgttcaacaaggcggaggaagtgctggagcttcaagccctgttgccggcaccggacttt
gtcatcgcccgcaagcaaaagcactattggcaggtgcaggaacggatgtttgattatcag
ggtagctatcggatggccaatgaggcttga
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