Mycobacteroides saopaulense: MYCSP_11290
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Entry
MYCSP_11290 CDS
T05445
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
msao
Mycobacteroides saopaulense
Pathway
msao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MYCSP_11290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msao03000
]
MYCSP_11290
03400 DNA repair and recombination proteins [BR:
msao03400
]
MYCSP_11290
Enzymes [BR:
msao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MYCSP_11290
Transcription factors [BR:
msao03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MYCSP_11290
DNA repair and recombination proteins [BR:
msao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MYCSP_11290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ALR11932
LinkDB
All DBs
Position
2295664..2297145
Genome browser
AA seq
493 aa
AA seq
DB search
MELNAEACYRAVQSRDTRFDGQFYTAVRTTGIYCRPSCPAITPKRQNVSFHPTAASAQAA
GYRACRRCLPDAAPGSPLWNIKSHLAVRAMRLIGDGVVERDGVDGLSRALGYSSRQLNRV
LLAELGASPLALARANRATTARLLIQRTDLPMSDIAFAAGFSSIRQFNDTIAAVFATTPS
KLRRELPRSESSTSSAIAGGVSLKLPLRQPHNVAWSTWLLQHHCARGVEDFSDGRYTRAL
RMPHGPVIVTLAVSADQVRADLQLSDMRDLAPSVARLRHLLDLDADPAAVDDALMSHPAL
APLVAEAPGIRVPGTVDGPELLLRTMIGQQISVAAANTATAALVAALGEQVTDRTGRVTH
LFPTAESVAAAGPEVMAGPTSRIGAVVSVADRLATGKLELHHGMTATDLRRQLLDIKGIG
PWTADYVVMRQLADPDVLLEHDLVLRRGAAAEGIDIAAARDCSPWRSYVSMHLWRKGIAV
QRRSSIRKPKETS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaactcaacgcagaggcgtgctaccgggccgtccagtcccgcgacacacgatttgac
gggcagttctacacggcggtgcgcactaccgggatctactgtcggccttcttgtccggcc
atcacgccgaaacgccagaatgtctcgtttcaccccactgccgcctccgctcaggctgcc
ggatatcgggcctgcaggcggtgtctaccggacgccgcgcccgggtcgcctctgtggaat
atcaagtcccacttggcggtgcgcgcgatgcgtctcatcggcgacggagtggtcgagcgc
gacggtgtggacgggctgtcacgcgccctcggatattcgagccgtcagctcaacagggtt
ctgctggctgagctcggcgcaagccccctggccctggcccgcgccaaccgggccaccacg
gcgcgcctactgattcagcggaccgacctaccgatgtccgatattgccttcgcggccggt
ttttccagcatcaggcagttcaacgacacgattgccgcggtattcgcgaccactccgtca
aagctacgcagggagctcccccgtagcgagagcagcacctcatctgccattgccggcggt
gtcagcctcaaactcccactgcggcagccccataacgtcgcctggtcgacgtggctgttg
caacatcactgcgcgcggggagtcgaggacttttccgacgggcgctacacccgcgcgttg
aggatgccgcatggccccgtgatcgtgactctggcagtgtccgccgatcaggtacgggcc
gatctgcagctcagcgatatgcgcgacctggcgccctcggtggcgcgactgcgccacctg
ctcgacctcgacgccgatcccgcggcggtcgatgacgcactgatgtcccacccggccctt
gctcccctggttgcggaggcgcccggcatccgagttcccgggaccgtggacgggccggaa
ctcctgttgcgcaccatgatcgggcagcagatatccgtcgccgccgccaataccgcgacg
gcagcactggtcgccgcactcggcgagcaggtgaccgaccggacgggacgtgtgacccac
ctcttccccaccgcagagtccgtcgctgctgcgggcccagaggttatggccggccccacc
tcgcggatcggtgcggtggtctcggtggccgacaggctcgcgacaggaaaactggaattg
catcatgggatgaccgcgactgacttgcgtcggcaactcttggatatcaagggaatcggg
ccttggactgctgactacgtcgtgatgcgtcaactcgccgacccggacgtcctcctcgag
catgacctcgtgttgcgacggggcgcggccgccgagggcatcgacatcgcagcagcccgc
gattgctccccgtggcgttcctacgtctccatgcacctgtggcgcaaaggaatcgccgtc
caaagacgttcaagtatccgcaagccgaaggagacctcatga
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