Mycobacteroides saopaulense: MYCSP_11515
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Entry
MYCSP_11515 CDS
T05445
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msao
Mycobacteroides saopaulense
Pathway
msao03030
DNA replication
msao03410
Base excision repair
msao03420
Nucleotide excision repair
msao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYCSP_11515
03410 Base excision repair
MYCSP_11515
03420 Nucleotide excision repair
MYCSP_11515
03440 Homologous recombination
MYCSP_11515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msao03032
]
MYCSP_11515
03400 DNA repair and recombination proteins [BR:
msao03400
]
MYCSP_11515
Enzymes [BR:
msao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYCSP_11515
DNA replication proteins [BR:
msao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MYCSP_11515
DNA repair and recombination proteins [BR:
msao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MYCSP_11515
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYCSP_11515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ALR11963
LinkDB
All DBs
Position
complement(2348733..2351441)
Genome browser
AA seq
902 aa
AA seq
DB search
MTAPATKTGTKQPTLLLLDGNSLAFRAFYALPAENFKTQSGLTTNAVYGFTSMLINLLRD
EAPTHVAAAFDVSRKTFRSERYPEYKATRSATPDEFRGQIDITKEVLQALGITVLAEEGF
EADDIIATLATQGQAEGFKVFVVTGDRDSLQLVNEDVTVLYPRKGVSDLTRFTPEAVVEK
YGLTPTQYPDFAALRGDPSDNLPGIPGVGEKTASKWILEYGSLQELVDKADTVRGKVGDS
LRANLGSVILNRELTDLVRTVPLPYVPAQLALAPWDRDQIHRLFDDLEFRVLRDRLFETL
EAVEPEVDEGFQLAGQALEPGTVADWLSTHAADGRRSGLAVVGTYTPYDGDATAIAIASA
DGDGAYIDTTTVTPEDETALADWLADPARPKALHEAKQAMHALAGRGWQLDGVTSDTALA
AYLVRPGQRSFALDDLSLRYLRRELRAEDDGEQQLSLLDEDGAGDAKAAQAQMLRARAII
DLADALDIELERIESATLLAEMELPVQRVLAGLESVGIAIDSDHLTSLQNQFATGIREAA
DAAYAVIGKQINLGSPKQLQVVLFDELGMPKTKKTKTGYTTDADALQTLFDKTGHPFLEH
LLTHRDVTRLKVTVDGLLKSVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPVRTEAGRE
IRDGFVVGQGFSELMTVDYSQIEMRIMAHLSADEGLIEAFNTGEDLHSFVAARAFGVPID
EVTAELRRRVKAMSYGLAYGLSAYGLATQLKISNDEAKEQMDQYFSRFGGVREYLHAVVD
QARKDGYTSTVLGRRRYLPDLDSGDRLRREAAERAALNAPIQGSAADIIKVAMITTDKAL
RDKGLRSRMLLQVHDELLFEVAEGERESLEALVRETMGSAYPLDVPLEVSVGYGRSWDAA
AH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcgcctgcgaccaagaccggtaccaaacagccgaccctgctgctgctcgacggc
aactcgctggcgttccgggcgttctatgcgcttcccgccgagaacttcaagacccagtcc
ggcctgaccaccaatgcggtgtacgggttcacctccatgttgatcaacctgctgcgcgat
gaggcgcccacgcacgtggccgctgccttcgacgtatcgcgcaagacattccgctccgag
cggtatcccgagtacaaggccacccggtcggccactcccgacgagttccgcggacagatc
gacatcaccaaggaagtgctccaggccctcggcatcaccgtgctcgccgaggaggggttc
gaggccgacgacatcatcgccaccctggccacgcagggacaggccgagggcttcaaggtc
tttgtggtcaccggtgaccgcgactcactacagctcgtcaacgaggacgtgacggtgctc
tatccgcgcaagggcgtcagcgacctcacccgattcaccccggaagccgtggtcgagaag
tacggactcacacccactcagtacccggatttcgcggcgctgcgtggcgacccgagcgac
aacctgcccggcatccccggagtcggcgagaaaaccgcgtcgaagtggatcctcgaatac
gggtcactgcaggagctggtcgacaaggccgacaccgtgcgcggcaaggtgggtgactcg
cttcgcgccaacctcggctcggtgatcctcaaccgcgagctcaccgatctggtgcgcacg
gtgccgcttccgtatgtaccggctcagctggcccttgccccctgggatcgcgaccagatt
caccgtctcttcgacgacctggaattccgggtgttgcgcgaccggctgttcgaaaccctc
gaggccgtcgaacccgaggtcgacgagggattccaactcgccggtcaggcattggaaccc
ggcacggttgccgattggctgagcacgcatgccgcagacggccgccgtagcggtctcgcg
gtggtcgggacctacacgccgtacgacggcgatgccacggccatcgcgatcgcgtccgcc
gatggggatggcgcgtacatcgacaccacaacagtcaccccggaggacgagacagccctg
gccgactggctcgccgacccggcacgccccaaggccctgcacgaggccaagcaggccatg
catgcgctggccggacgggggtggcagctcgacggggtcacctccgatactgcgctggcc
gcctatctggtgcgccccgggcaacgcagtttcgcgctcgatgacctctcgttgcgatat
ctacgccgcgagctccgcgcagaagacgatggggagcaacagctttcgttgctggacgag
gacggagccggcgatgccaaggccgcacaagctcagatgctgcgcgcccgcgccatcatc
gacctggccgacgcgctcgacatcgaactggaacgcatcgaatcggccaccctgctcgcc
gagatggagctaccggtgcagcgcgtactggcgggactggaatccgtgggcatcgcgatc
gacagcgatcatctgacatcgctgcagaatcagttcgccaccggtatccgggaagccgcc
gacgccgcatacgccgtgatcggtaagcagatcaacctgggttcgcccaaacagcttcag
gtcgtgctgttcgacgaactcggcatgcccaagaccaagaagaccaagaccggctacacg
accgacgcggacgccctgcagacgctgttcgacaagaccggtcatcccttcctcgagcat
ctgctcacccaccgcgatgtcaccagattgaaagtcaccgtcgacgggctactgaaatcc
gttgccgctgatggccgcatccacaccaccttcaatcagaccattgcggccacgggtcgg
ctgtcgtccaccgagccaaacctgcagaacattccggtgcgtaccgaggccggccgggaa
atccgcgacggcttcgtggtgggccagggcttctccgagctgatgacggtcgactacagc
cagatcgaaatgcgcatcatggcccacctgtcagccgacgagggactcatcgaggcgttc
aacaccggcgaggatctgcactcattcgtggccgcccgggccttcggcgttccgatcgac
gaggtcaccgccgagctgcgtcgacgggtcaaggcgatgtcctacggtctggcctacggt
ctgtccgcatacggtctggccacccagctcaagatctccaacgacgaggccaaagagcag
atggatcagtacttctcgcggttcggcggtgttcgcgagtacctgcacgccgtggtggat
caggcacgcaaggacgggtacacctcgacggtgctcggccggcgccgctacctgcccgac
ttggacagcggtgatcgtctgcgccgcgaggccgccgaacgtgcggccctcaacgcgccc
atccaggggagcgccgccgacatcatcaaggtcgcgatgatcaccaccgacaaggccctg
cgcgacaagggcttacggtctcgcatgctcttacaggtacacgatgagctcctcttcgaa
gtggccgagggcgaacgggaaagcctggaggcattggtacgcgagaccatgggctcggcg
tatccgctcgatgtgccactcgaggtttccgtcgggtatgggcgcagctgggacgccgcg
gcgcactga
DBGET
integrated database retrieval system
