Mycobacteroides saopaulense: MYCSP_11995
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Entry
MYCSP_11995 CDS
T05445
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msao
Mycobacteroides saopaulense
Pathway
msao03030
DNA replication
msao03430
Mismatch repair
msao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYCSP_11995
03430 Mismatch repair
MYCSP_11995
03440 Homologous recombination
MYCSP_11995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msao03032
]
MYCSP_11995
03400 DNA repair and recombination proteins [BR:
msao03400
]
MYCSP_11995
Enzymes [BR:
msao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYCSP_11995
DNA replication proteins [BR:
msao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYCSP_11995
DNA repair and recombination proteins [BR:
msao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYCSP_11995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ALR12033
LinkDB
All DBs
Position
complement(2443773..2447330)
Genome browser
AA seq
1185 aa
AA seq
DB search
MSSSNSSFVHLHNHTEYSMLDGAAKIKPMLAEVERLGMTAVGMTDHGNMYGASEFYNVAT
ATGVKPIIGIEAYIAPASRFDTKRVFWGDPGQKSDDVSGSGSYTHMTMVAENATGLRNLF
KLSSLASFEGQLGKWARMDAELIAEHASGVIATTGCPSGEVQTRLRLGQENEALAAAAKW
QEIFGKDNFFLELMDHGLSIERRVREGLLEVGKKLGIPPLATNDCHYVTKDHAHNHEALL
CVQTGKTMSDPTRFKFDGDGYYLKPASEMRDLWDDAVPGACDNTLLIAERVQLYEDVWNF
KDRMPVFPVPEGEDQDSWLRKEVDRGLERRFEGVPGGVPDEYFTRAHYELDVIKQKGFPA
YFLVVGDLVSHAKEVGIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSA
PDIDIDFDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIAD
RITKALPPPIMAKDIPVWGITDPEHERYKEAAEVRTLIDTDPDVRTIFQTARGLEGLIRN
AGVHACAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGD
ALDNIKANRGIDLDLDHLPLDDPATYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDI
VAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKEILSETYGLIVYQEQIMF
IAQKVASYSMGKADALRKAMGKKKLEVLEAEYKGFYEGMTNNGFSEKAVKALWDTILPFA
GYAFNKSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVL
PPDVNESVHNFASVGEDIRYGLGGVRNVGANVVQSLIATREEKGAFTDFSDYLHKIDIAA
CNKKVTESLVKAGAFDSLGHPRKGLFLVQSDAVDSVLGTKKAEAMGQFDLFGGGGDDSAE
SSSVFAIKVPDDEWEEKHKLALEREMLGLYVSGHPLNGVAHLLSRQTDTQIPTILEGDIP
NDTQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVLFFPQAYSVYGAEIADDAVVL
VNAKVAIRDDRISLIANDLVVPDFSQAADDRPVAVTMPTRQCTIDKVTALKQVLARHPGT
NQVHLRLISGERVTTLELDQSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcctcgaattcttcgttcgtgcacctgcacaaccacaccgagtactcgatgctc
gacggtgcggcgaagatcaagccgatgcttgccgaggtcgagcgcctgggcatgaccgcg
gtcggcatgaccgatcacgggaacatgtacggcgccagcgagttctacaacgtcgccacc
gccaccggggtcaaaccgatcatcggcatcgaggcgtacatcgccccggcgtcgcgattc
gacaccaaacgtgtgttctggggcgatccgggccagaagtccgacgacgtgtcgggctcg
ggttcgtacacccacatgacgatggtggccgagaacgcgacgggcctgcgcaacctgttc
aagctgtcgtcgctggcgtccttcgagggtcagctcggcaagtgggcccggatggatgcc
gagctcatcgccgaacatgccagcggcgtcatcgccaccacgggatgtccttccggtgag
gtgcagaccaggcttcggctcgggcaagagaacgaggcacttgctgccgcggccaagtgg
caggagatcttcggtaaggacaacttcttcctggagctgatggaccatgggctgtccatc
gaacgccgggtgcgcgagggcctgttggaggtgggcaagaagctcggcattccaccgctg
gccaccaacgactgccactacgtcaccaaggaccacgcgcacaaccacgaggcgttgctg
tgtgtgcaaaccggcaagaccatgtcggaccccacccgcttcaagttcgatggtgacggt
tactacctcaagccggcatcggagatgcgggacctgtgggatgacgcggtccccggtgcc
tgcgacaacacgctgctgatcgccgagcgcgtgcagctctacgaggatgtctggaacttc
aaggaccggatgccggtcttcccggttcccgagggcgaggaccaggactcgtggctgcgc
aaggaagtcgatcggggcctggagcgccggttcgagggtgttcccggcggagtgcccgac
gagtacttcacccgtgctcactacgagctcgacgtcatcaagcaaaagggattccccgca
tactttctggtcgtcggcgacctcgtttcccatgccaaagaggtcggcatccgcgtcggc
cccggccgtgggtctgcggcgggctcgctcgtcgcctacgcgctgggcatcacgaacatc
gacccgattccgcacggtctgctgttcgagcgattcctcaacccggaacggccgtcggca
ccggatatcgacatcgacttcgacgatcgccgccgcggcgagatggttcgctacgccacc
gagaagtgggggagcgaccgggtggcgcaggtcatcaccttcggcaccatcaagaccaag
gccgcactgaaggattcggcgcgaatccactacgggcagcccggtttcgcgatcgcagac
cgcatcaccaaggcgctgccgccgccgatcatggccaaggacatcccggtgtggggcatc
accgatcccgagcatgagcggtacaaggaggccgccgaggtccgcacgctgatcgacacc
gatccggacgtgcgcaccattttccagacggcacgcggtctggaaggtctgatccgcaac
gcgggcgtgcacgcctgcgcggtcatcatgagttcggagccactgaccgaggccatcccg
ctgtggaagcgcccacaggacggcgccatcatcaccggttgggactacccgtcctgtgag
gccatcggcctgttgaagatggacttcctgggcctgcgcaacctcaccgtcatcggtgac
gccctggacaacatcaaggccaaccgcgggatcgatctggacctcgatcacctgccgctc
gatgatccggccacctacgaattgctttcccgcggtgacactctcggggtgttccagctc
gatggcgggccgatgcgggacctgctgcggcgcatgcaacccaccgggttcaacgacatc
gtcgcggttctggcgctataccgccccggcccgatgggcatgaacgcccacaacgactac
gccgaccgtaagaacggccgtcagccgatcaagcccattcatcccgagctggaagagccg
ctcaaggagatcctctccgagacgtacggcttgatcgtctaccaagagcagatcatgttc
atcgcccagaaggtcgcctcgtactcgatgggtaaggccgacgcgctccgcaaggccatg
ggtaagaagaagctcgaagtgctggaggccgaatacaagggcttctacgagggcatgacc
aacaacggcttctccgagaaggccgtgaaggcgttgtgggacaccattcttccgttcgcc
ggctatgccttcaacaaatcgcacgccgccggctacgggctggtgtccttctggacggcc
tacctcaaggccaactatccggccgaatacatggccggactgctgacgtcggtgggtgat
gacaaggacaaggccgccgtctatctcgccgactgccgccgcctgggcatcacggtgctg
ccgccggacgtgaacgagtccgtgcacaacttcgcctcggtgggagaggacatccgctac
gggctcggcggtgtccgaaatgtcggtgccaacgtggtgcagtcgctcatcgccacccgc
gaggaaaagggtgcgttcaccgacttctcggattacctgcacaagatcgacatcgcggcc
tgcaacaagaaggtcacggaatcgctggtgaaggcgggcgccttcgactcgctgggccat
ccacgcaaaggtcttttcctcgtgcaatccgacgccgtggactcggtgctgggcaccaaa
aaggccgaagccatgggacagttcgatctgttcggcggcggtggggacgacagtgcggag
tcttcgtctgtgtttgcgattaaggtgcccgacgacgagtgggaagaaaaacacaagctg
gccctggagcgggaaatgctgggcctgtacgtatccgggcatccgctcaacggggtggcg
cacctgctgagccgtcagaccgacacccagatccccacgattctggaaggcgatatcccc
aacgacacccaggtgcgtgtgggaggcatcctggcctcggtcaaccgtcgcgtcaacaag
aacgggatgccgtgggcctcggcgcagctcgaggatctcaccggtggtatcgaggtgctc
ttcttcccgcaggcctactcggtatacggtgccgagatcgccgacgacgcggtggtgctc
gtgaacgccaaggttgccatccgggatgaccggatctccctgatcgccaatgaccttgtg
gtacctgacttctcgcaggcagccgatgatcgtccggtcgcggtgaccatgccgacccgg
caatgcaccatcgacaaggtgacggcgctcaagcaggtgttggcgcggcatccgggcacc
aaccaggtacacctgcggttgatcagcggagaacgtgtcaccaccctggaactcgatcag
tcgcttcgggtgacgccctcgtcggcgttgatgggcgacctcaaggcgctgctcgggccg
ggttgcctgggcggctag
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