Mycobacteroides saopaulense: MYCSP_13590
Help
Entry
MYCSP_13590 CDS
T05445
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
msao
Mycobacteroides saopaulense
Brite
KEGG Orthology (KO) [BR:
msao00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MYCSP_13590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msao03021
]
MYCSP_13590
Transcription machinery [BR:
msao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYCSP_13590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Motif
Other DBs
NCBI-ProteinID:
ALR12272
UniProt:
A0A1S1JKN9
LinkDB
All DBs
Position
2773849..2775249
Genome browser
AA seq
466 aa
AA seq
DB search
MAATKAAPVKQTTAATPSKTTATKAAPAKKAPAKAAPAKKAPAKKAPAKATATKAAPAKK
APAKKAPAKKAAAKATDPALEPQGTAEDAELEPGDDLDTDLADDADIEADLAEAAAEPEP
EAEAESDDEPSEKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLN
AEEEVELAKRIEAGLYATQIVTELTEKGEKLPAAQRRDMMWICRDGDRAKNHLLEANLRL
VVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQ
ARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPIS
LDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLT
DGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccacgaaagcagctccggtgaagcagaccaccgccgcaacaccttcgaagacc
accgccaccaaggcagcccccgccaagaaggcgcccgccaaggccgcgccggccaagaag
gcgcccgcgaagaaggcaccggccaaggccaccgccaccaaggccgcgccggccaagaag
gcgcccgcgaagaaggcacccgccaagaaggccgcagccaaggccaccgatcccgctctc
gagccacagggcaccgccgaggacgccgagctcgagcccggcgacgatctggacaccgac
ctcgccgacgacgccgacatcgaggccgacctggccgaagccgccgccgaaccggagccc
gaggcggaagccgagagtgacgacgagccgtctgagaaggacaaggcgtccggcgatttc
gtctgggacgaggaagagtccgaggcgctgcggcaggcccgtaaggacgccgagctcacc
gcgtccgccgactcggtgcgtgcgtacctcaagcagatcggcaaggtcgcgctgctcaac
gccgaagaggaagtcgagctggccaagcgcatcgaggccggcctctacgccacccagatc
gtcaccgagctgaccgagaagggcgagaagcttcccgccgcgcagcgccgcgacatgatg
tggatctgccgtgacggagaccgcgccaagaaccacctgctggaagccaacctgcgtctg
gtggtgtcgctggccaagcgctacaccggccgtggcatggccttcctggacctcatccag
gaaggcaacctgggtctgatccgtgcggtcgagaagttcgactacacaaagggttacaag
ttctcgacgtacgccacctggtggatccgtcaggccattacccgcgcgatggccgaccag
gcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaacaagctcggccgcatc
cagcgtgagctgctccaggacctgggccgtgagcccacgcccgaagagctggccaaggaa
atggacatcacgccggagaaggtgctggagatccagcagtacgcgcgtgagccgatctcc
ctggaccagaccatcggcgacgagggtgactcgcagctcggtgacttcatcgaggattcc
gaggccgtggttgccgtcgacgcggtgtccttcaccctgctacaagatcagctgcagtcg
gtgctggagacgctctccgagcgcgaggccggcgtggtgcgtctgcgcttcggtctcacc
gacggccagccgcgcacgctcgacgagatcggccaggtgtacggggtcacccgtgagcgc
atccggcagatcgagtccaagaccatgtcgaagctgcgccaccccagccgctcgcaggtc
ctgcgcgactacctcgactag
DBGET
integrated database retrieval system