Mycolicibacterium sarraceniae: MSAR_10530
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Entry
MSAR_10530 CDS
T07083
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
msar
Mycolicibacterium sarraceniae
Pathway
msar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSAR_10530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msar03019
]
MSAR_10530
03400 DNA repair and recombination proteins [BR:
msar03400
]
MSAR_10530
Enzymes [BR:
msar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSAR_10530
Messenger RNA biogenesis [BR:
msar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MSAR_10530
DNA repair and recombination proteins [BR:
msar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MSAR_10530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
TylF
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
BBY57917
UniProt:
A0A7I7SLN9
LinkDB
All DBs
Position
complement(988001..990118)
Genome browser
AA seq
705 aa
AA seq
DB search
MVAMTSRDDAQKILEQLAGPTAVLRDDQWTAIEALVVQRRRALVVQRTGWGKSAVYFIAA
KLLRERGHGATVIVSPLLALMRNQVAAAQRAGVRAATINSGNVTEWDEIHQRVNNGDLDV
LLVSPERLNNPDFRDNVLPALAADAGLVVVDEAHCVSDWGHDFRPDYRRIRTLLAELGSE
VPVLATTATANDRVVNDVAAQLGVGGAGNVPGGGLDTLVLRGGLDRESLRLSVIQAGGGA
QRTAWLAEHLESLPGSGIVYTLTVAQAHDVAALLREHGHEVAAYTGSTENAEREQLEADL
LGNRVKALIATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRSTASAEVVLLPGR
EDQDVWRYFASVAFPSETMVRNVIGELEPDRPLSTPALEPLVDLGRTRLEMVLKVLDVDG
AVRRVKGGWLATGQSWVYDEVRYRQLDEARRREQQAMLDYQSTDECRMTFLRRQLDDPDL
SDGERCGRCDNCAGAHFSVAVNDEATALVQERLMRPGVEIAPRKQWPSGLAKLGIELSGR
IGDGPEPGRAIGRLTDLGWGPRLRRLLDEPDGDVPPDVVQAAVKVLAAWDWGTRPTAVLA
LDSDSHPVLIASLARELARLGRLTDLGVLRYAAGRRPVSAANSAYRVAALDGAWSPESAL
IAAAGGPVLLVDDLTDTGWTLTMAARVVADAGAPAVLPLVLAATS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggtagccatgacgagtcgcgacgacgcgcaaaagatcctggaacagctggctgggccg
accgcggtcctgcgcgacgaccagtggacggccatcgaagcgttggtggttcagcgccgg
cgggcgctggtcgtgcagcgcaccgggtggggcaaatcggcggtgtacttcatcgccgcc
aagctgctgcgcgagcggggccacggtgccacggtgatcgtgtcgcccctgctggcgttg
atgcgcaaccaggttgcggccgcgcaacgcgccggtgtgcgggcggccacgatcaattcc
ggcaacgtcaccgagtgggacgagattcatcagcgggtcaacaacggtgacctcgacgtc
ctactggtcagcccggaacggttgaacaacccggactttcgcgacaacgtgctaccagcc
ctggccgccgatgccgggcttgtggtggtcgacgaggcgcactgcgtctcggactggggc
cacgactttaggcccgactaccggcggatccgcactttgctggccgaactcggttcagag
gtaccggttttggcgaccaccgccaccgccaacgaccgtgtggtcaacgatgtcgccgct
cagctgggcgtcggcggtgccggcaatgtgccgggcggtggcctcgacaccctggttctg
cgcggtgggctcgatcgtgagtcgttgcggttgtcggtgatacaggccggcggtggggcg
cagcgcacggcctggctggccgagcatctggaatcgctgccgggttctggaatcgtttac
acgctgaccgtcgcccaggcgcatgatgtggcggcgctgctgcgcgagcacgggcacgag
gtggccgcgtacaccggatcgacggaaaacgctgagcgagaacaactcgaggccgatctg
ctgggcaaccgggtgaaggcgctgatcgccacctcggcgctggggatgggattcgacaag
ccggatctcggattcgtcgtgcacctcggagcgccgtcgtcaccgatcgcgtattaccag
caggtcggtcgtgcgggccgttcgacggccagcgccgaggtggtgctgttgcccggacgt
gaggaccaggacgtctggcggtacttcgcgtcggtggcattcccctcggaaactatggtg
cgcaacgtcattggtgaactggagcccgatcggccgttgtcgacacccgccctggagccg
ctggtggatctgggccgcacccggctggagatggtgctcaaggtgctcgacgtcgacggg
gcggtgcggcgggtcaaaggtggctggctggccactggacaatcgtgggtttacgatgag
gtccgctatcgccagctcgatgaggcccgccgccgtgagcagcaggccatgctcgactac
cagagcaccgacgagtgccgaatgacgttcctgcgcaggcaactcgacgatcctgatctc
agcgacggcgaacgctgtgggcgatgcgataactgcgcgggtgcgcatttcagtgtcgcg
gtgaacgacgaggcgaccgcactggtgcaggagcggctgatgcgacccggcgtggagatc
gccccgcgcaagcagtggccgtccgggttggcgaagctgggcatcgaactgagcggccgt
atcggtgacgggcccgagccgggccgggcgatcgggcgactcaccgacttgggctggggc
ccgcggctgcggcgcttgctcgacgagcccgacggcgacgtgccgccagatgtggtgcag
gccgccgtcaaggtgctggccgcctgggactggggcacccgtccgaccgcggtgctggcg
ctggactcggactcccatcccgtcctgatcgcctcgctggcgcgggagctggctcgcctt
ggcaggctgaccgacctcggcgtgctgcggtacgcggcggggcgccggccggtcagcgcg
gccaactccgcctatcgggtcgccgccctggacggtgcatggtcgccggaatcggcgttg
atcgctgcggccggtggaccggtgctactcgtcgacgatctgaccgataccggatggacg
ctgacgatggccgcgcgcgttgtggccgacgccggcgcacccgccgtgctgcctctggtg
ctcgccgccaccagctga
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