Mycolicibacterium sarraceniae: MSAR_28610
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Entry
MSAR_28610 CDS
T07083
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
msar
Mycolicibacterium sarraceniae
Pathway
msar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSAR_28610 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msar03019
]
MSAR_28610 (deaD)
03009 Ribosome biogenesis [BR:
msar03009
]
MSAR_28610 (deaD)
Enzymes [BR:
msar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MSAR_28610 (deaD)
Messenger RNA biogenesis [BR:
msar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MSAR_28610 (deaD)
Ribosome biogenesis [BR:
msar03009
]
Prokaryotic type
rRNA helicases
MSAR_28610 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BBY59725
UniProt:
A0A7I7SUJ6
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All DBs
Position
2778317..2780014
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AA seq
565 aa
AA seq
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MTSPDDTPQTFADLQIHPAVLQAVADVGYETPSAIQAATIPALLAGSDVVGLAQTGTGKT
AAFAIPILSKIDPTSRTTQALVLAPTRELALQVAEAFSRYGAHRNINVLPIYGGSSYVPQ
LAGLKRGAQVVVGTPGRVIDHLEKGSLDLSHLDYLVLDEADEMLQMGFAEDVERILADTP
EYKQVALFSATMPPAIRKITSKYLHDAVEVAVKSKTATAENITQRYIQVAGPRKMDALTR
LLEVEPFEAMIVFVRTKQATEEVAEKLRARGFAASAINGDIPQALRERTIAALKSGAIDI
LVATDVAARGLDVERISHVLNYDIPHDPESYVHRIGRTGRAGRSGTALLFVSPRERHLLK
SIEKVTRQPVTEDQLPSVEDVNAQRVAKFQDSITEALNAPGFDMFRRLIEDYERDNDVPM
ADIAAALALQSRDGAEFLMTEPPPEKRRERPDRDERERAPRKTRDDLATYRIAVGKRHKV
GPGSIVGALANEGGLHRSDFGHITIKSDFSLVELPATLSKQTLKALENTRISGILIDLKP
DRGSPRYDTRPESRPTGGKPRRTSR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacatccccggacgacaccccccagaccttcgccgacctgcagatccaccccgccgta
ctgcaggccgtggccgacgtcggctatgaaacgccctcggcgatccaagcggccaccatc
ccggcgctgctggcgggctccgatgtcgtcggtctggcccagaccggaaccgggaaaacc
gcggcattcgcgatcccgattctctccaagatcgacccgaccagccgcaccacgcaggcg
ctggtgctggccccgacgcgtgagcttgcattgcaggtcgccgaggcattcagccgctac
ggcgcgcaccgaaacatcaatgtgcttccgatctacggcggctcctcctacgtcccgcag
ctggccggcctcaagcgcggcgcgcaggtcgtcgtcggaaccccgggacgcgtcatcgac
cacctggaaaagggcagcctggacctgtcgcacctggactatctggtactcgacgaggcc
gacgagatgctgcagatgggtttcgccgaggatgtcgagcggatcctggccgataccccg
gagtacaagcaggtcgcgctgttctcggccaccatgccgcccgcgatccgcaagatcacc
tctaagtacctgcacgacgccgtcgaggtggcggtcaagtcgaaaaccgccaccgccgaa
aacatcacccagcgctatatccaggtcgccgggccgcgcaagatggatgcgctgacccgg
ctgctcgaggtggaaccgttcgaggcgatgatcgtgttcgtccggaccaagcaagccacc
gaggaggtcgccgagaagctgcgggcccgcgggttcgccgcctccgccatcaacggtgat
atcccgcaggcgcttcgtgagcggaccatcgctgcgctcaagagcggcgcgatcgacatc
ctggtcgccaccgatgtggcggcacgcgggctggacgtcgaacgcatctcccatgtgctc
aactacgacatcccgcacgatccggagtcctatgtgcaccgcatcgggcgcaccgggcga
gccgggcgatccgggaccgcgctgttgttcgtgtccccgcgggaacgtcatctgctgaag
tcgatcgagaaggtgacccgccagccggttaccgaagatcagctgcccagtgtcgaggac
gtcaacgcccagcgggtggccaagttccaggactcgatcaccgaggcgctcaacgcacca
ggcttcgacatgttccgtcgcctcatcgaggactacgagcgcgacaatgacgtgccgatg
gccgatattgccgcggcgctggcgctacaaagtcgtgacggtgcggaattcctgatgacc
gagccgccgcccgagaagcgtagagagcggcccgaccgcgacgagcgggaacgcgcgccg
cgcaagactcgcgacgacctggcgacgtatcgcatcgcagtcggcaagaggcacaaggtc
ggtcccggctcgatcgtcggcgcgctggccaacgagggtgggctgcaccgcagcgatttc
gggcacatcaccatcaagagcgatttctcgttggtcgagctgccggcgacgttgtccaag
cagacgctgaaagcccttgagaatacccggatttccgggatcttgatcgacctgaagccc
gaccgtggcagtccacgctacgacacgcgtcccgagtcgcgtcccaccggcgggaagccc
cggcgcacgagtcgatga
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