Mycolicibacterium sarraceniae: MSAR_29790
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Entry
MSAR_29790 CDS
T07083
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
msar
Mycolicibacterium sarraceniae
Pathway
msar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSAR_29790 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msar03021
]
MSAR_29790 (rho)
03019 Messenger RNA biogenesis [BR:
msar03019
]
MSAR_29790 (rho)
Transcription machinery [BR:
msar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MSAR_29790 (rho)
Messenger RNA biogenesis [BR:
msar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MSAR_29790 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
VWA_2
S1CSD-TOTE-2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBY59843
UniProt:
A0A7I7SSY2
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All DBs
Position
2936024..2937961
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AA seq
645 aa
AA seq
DB search
MTDTDLITAGDSAPQTEAPAATAEIPSAPGSQAAPSGDAGRAGSLSTMVLPELRALANQV
GVKGTSGMRKGDLIAAIKERQSGGNGANHSAEKAEKIADNATDSAAKAQVEAPAEQASEP
HQATEKTESNGGGEPRRRERRAATRGAGSAGAENTEQKSQDNSPEQGEKRENPNQSRSEN
REASGQGGQQNRGNQNRDNNQNRDNQQNRGNQQNRDDDDDDDGRQGRRGRRFRDRRRRGE
RTPGEGGGNEAELREDDVVQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVRKNGLR
RGDAVTGAVRMPKEGEGGQNQRQKFNPLVRLDSVNGGPVEEARNRPDFTKLTPLYPNQRL
RLETTSDRLTTRVIDLIMPIGKGQRALIVSPPKAGKTTIMQDIANAITRNNPECHLMVVL
VDERPEEVTDMQRSVKGEVIASTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVLLDSIT
RLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEHGGSLTIIATAMVETGSTGD
TVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLSPDEFSVVHKLRRVLS
GLDSHQAIDLLMSQLRKTKNNYEFLVQVSKTAPGGGGNSGNGDLD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatacggacctcatcacggctggagatagcgcaccgcagacggaggcgcccgcc
gcgaccgcagaaatcccctcggcgcctggttcgcaggccgccccgagcggggatgcgggc
cgggccggttctctgtccacgatggtcctgcccgagctccgtgccctggccaaccaggtc
ggcgtcaagggaacctccgggatgcgcaagggcgacctgatcgccgcgatcaaggagcgc
cagagcggcggcaacggtgccaaccacagcgccgagaaggccgagaaaatcgccgataac
gccactgatagcgccgccaaggcacaagtcgaagcccctgccgagcaggcaagtgagccc
catcaggccaccgagaagaccgagtccaacggcggtggcgagccgcgacgccgtgagcgc
cgggccgcaacccgtggtgccggctccgctggcgccgagaacaccgagcagaagtcgcag
gacaatagccctgagcagggcgaaaagcgcgagaacccgaaccagagtcggtcggagaac
cgcgaggcgtccggccagggtggccagcagaatcgtggcaaccagaaccgcgataacaac
caaaatcgcgacaaccagcagaatcgcggcaaccagcagaatcgcgatgacgatgatgac
gacgacggccgccagggccgtcgcggccgccggttccgtgaccgtcgccgtcgtggcgag
cgcacccccggcgaaggcggcggcaatgaggccgaactccgcgaggacgacgtcgttcag
ccggttgccggcatcctcgacgtgctcgacaactacgcattcgtgcgcacctcgggctac
ctagccggccccaacgatgtctacgtctcgatgaacatggtccgcaagaacggcctgcgc
cgcggtgacgccgtcaccggcgcggtccggatgcccaaggagggcgagggcggccagaac
cagcgccagaagttcaacccgctggttcgcctcgacagcgtcaacggcggtccggtcgaa
gaggccagaaaccggcccgatttcaccaagctgaccccgctgtacccgaatcagcggctg
cgcctggagaccacctctgaccggctgaccacccgcgtgatcgacctgatcatgccgatc
ggcaagggccagcgtgccctcatcgtgtcgccgcccaaggccggtaagaccacgatcatg
caggacatcgccaacgcgatcacccgcaacaaccccgagtgtcacctgatggtggtgctg
gtcgacgagcgacctgaagaggtcaccgacatgcagcgctcggtcaagggtgaggtcatc
gcctccaccttcgaccgcccgccgtcagaccacacccaggctgccgagctggccatcgag
cgcgccaagcgcctggtcgagcagggcaaggatgtcgtcgtgctgctcgactcgatcacc
cggctgggccgcgcctacaacaacgcctccccggcgtctggccgcatcttgtccggtggt
gttgactcgaccgccctgtatccgcccaagcgcttcctgggtgccgcccgcaacatcgag
cacggtggctcgctgacgatcatcgcgacggccatggtggagaccggctccaccggtgac
acggtgatcttcgaggagttcaagggcaccggcaacgccgagctcaagctcgaccgcaag
atagccgagcgccgggtgttcccggcggtcgacgtcaacccgtcgggtacccgcaaggac
gagctgctgctgagccccgatgagttctccgtcgtgcacaagctgcgtcgtgtgctctcc
ggcctcgacagccaccaagccatcgacctgttgatgagccagctgcgcaagaccaagaac
aactacgagttcctggtgcaggtgtccaagacggcaccgggcggcggcggtaactccggc
aacggggatctcgactag
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