Mycolicibacterium sarraceniae: MSAR_42200
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Entry
MSAR_42200 CDS
T07083
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
msar
Mycolicibacterium sarraceniae
Brite
KEGG Orthology (KO) [BR:
msar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msar03019
]
MSAR_42200
Enzymes [BR:
msar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MSAR_42200
Messenger RNA biogenesis [BR:
msar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MSAR_42200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND3
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBY61084
UniProt:
A0A7I7SVN7
LinkDB
All DBs
Position
complement(4126758..4129571)
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AA seq
937 aa
AA seq
DB search
MTTSPDEGGQLRQFTELLTFRLDPFQVQACEALERGHGVLVCAPTGAGKTVVGEFAVHLA
LAAGRKCFYTTPIKALSNQKHNDLVRRYGAENIGLLTGDQSVNGDAPVVVMTTEVLRNML
YAGSEALQGLSHVVMDEVHFLADRMRGAVWEEVILHLPEDVRLVSLSATVSNAEEFGGWI
QTVRGDTTVVVDEHRPVPLWQHVLVGKRLFDLFDYDREGKQHLVDPDLIRHIAHRREAER
LTDWEPRRRGPGRQGGRSGLSRPPARPDVIASLDREGLLPAITFIFSRAGCDAAVKQCLR
SPLRLTNDNDRKRIAEVIDRRCGDLAESDLVVLDYYEWREGLLRGLAAHHAGMLPVFRHT
VEELFTAGLVKAVFATETLALGINMPARTVVLEKLIKFNGEQHMPLTPGEYTQLTGRAGR
RGIDIEGHAVVLWQPGENTAEPSEIAGLASTRTFPLKSSFAPSYNMTINLVNQMGPEQAH
QLLERSFAQYQADRSVVGMVRGVERGEKMLSEIAAELGWDRRANPDREPPILDYVRLRAK
ISERERAQSRASRLQRRAATADALAALRRGDIININQGRRGGLAVVLEPANDPADPRPLV
LTENRWAGRVSSADFAGITSALGSMSLPKRVEHRQPRVRRDLASALLSASTGLMVPSARR
RRGVGDEPADIDPELLELREAMRKHSVHGLADREAKVRIGERYLRVERDNDQIRNKVSAA
TNSLARTFDRIVGLLTERGFITVGQERSDSGMGTRGGDPRVTADGRLLARIYSESDLLVA
ECLRTRIWKGLGPAELAAVLSAMVFETRGSDGPTPSHAIDMPTQKVRRALVETRRLSGQL
RADENRHRIAPTREPDEGFVPAVYRWATTGDLAAALAASDVAGGGTPLPAGDFVRWCRQV
LDLLDQVRNAGPEAGLRATAKRAIDDIRRGVVAVDGG
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgacgacatcacctgacgagggcgggcaactgcggcagttcaccgagctgctgacgttc
cggctcgacccgtttcaggtgcaggcgtgtgaggcactggagcgcggccacggcgtgctg
gtgtgcgcaccgactggcgcgggcaagacggtcgtcggcgagttcgcggtgcatctggcg
ctggcggcgggccgaaagtgcttctacaccacgccgattaaggcgctgagcaatcagaag
cacaatgacctggtgcgccgctacggcgcggagaacatcggtctgttgaccggcgatcag
tcggtcaacggcgatgcccccgtggtggtgatgaccaccgaggtgctgcgcaacatgttg
tacgccggttcagaagcgctgcagggtctttcgcatgtggtgatggacgaagtgcacttc
ctggccgaccggatgcgcggcgcggtgtgggaagaggtcatcctgcacctgcctgaggat
gtgcggctggtcagtctgtcggcaacggtgagtaatgccgaggagttcggcggctggatc
cagaccgtgcgcggggacaccaccgtcgtggtcgacgagcaccggccggtgccgctgtgg
cagcacgtgctggtcggtaagcggctgttcgacctgttcgactacgaccgcgaaggtaaa
cagcacctcgtcgacccggacctgatccggcacatcgcgcatcgtcgcgaggccgaacgg
ttgaccgattgggagccgcgccgccgcgggcccgggcgccaaggtggccgatcgggccta
tcccgcccgccggcccgtcccgatgtgatcgcctcgctcgaccgcgaaggactgttgccg
gccatcacgttcatcttttcgcgcgccggctgcgatgccgccgtcaagcagtgcctgcgt
agcccgctgcggctcaccaacgacaacgatcgcaagcggatcgcggaggtgatcgaccgc
cgttgcggcgatctcgccgaatccgacctggtggtgctcgactactacgaatggcgcgaa
ggcctgctgcgcgggctggcggcccaccacgccggcatgctgccggtgttccggcatacc
gtcgaggaactgttcaccgctgggctggtcaaagcggtgttcgcgaccgagacgctggcg
ctgggcatcaacatgccggcccgtaccgtcgtgctggagaagctcatcaagttcaacggc
gagcagcacatgccgttgacgccgggggagtacacgcagctgaccgggcgcgcggggcgg
cgcgggatcgacatcgagggccatgccgtcgtgctgtggcagcccggtgaaaacaccgcc
gagccgtcagaaattgccggcctggcatcgacccgaaccttcccgctgaagagttcgttc
gcgccgtcgtacaacatgacgatcaacctggtgaaccaaatgggccccgaacaggcgcac
cagctgttggagcgctcgttcgcgcagtaccaggccgaccggtcggtcgtcgggatggtt
cgtggtgtcgagcgcggcgagaagatgctcagcgagatcgctgccgagctgggctgggac
cgccgggcgaatcccgaccgcgagccgccgatcctcgactatgtccggctacgcgccaag
atcagcgagcgtgagcgggcgcagtcccgggcgtcgcggctgcagcgcagagccgccacc
gccgacgcgttggcggcgctccgccgcggcgacatcatcaatatcaaccaggggcgccgc
ggcggattggccgtcgttctggagccggccaacgaccccgccgatccgcgcccgctggtg
ttgaccgaaaaccgttgggccggaagggtttcctcagccgactttgccgggatcacgtca
gcgctggggtctatgtcgctacccaagcgggttgaacatcgtcagccgagggtgcgccgg
gatctggcgtcggcgttgctgtcggcgtcgacgggtctgatggtgccctcggcccgtcgg
cggcgcggcgtgggcgacgagccggccgatatcgacccggagctgctggagctgcgcgaa
gcgatgcgcaagcactcggtgcacgggctcgccgaccgggaagccaaggtgcgcatcggc
gagcgctacctgcgggtggaacgcgataacgaccagatccgcaacaaggtcagtgccgcg
accaattcgctggcccgcaccttcgaccggattgtggggctgctgaccgagcgcgggttc
atcaccgtggggcaggagcgaagcgactcggggatgggcacccgcggcggcgacccgcgg
gtgacggccgacggccggctgctggcgcggatttacagcgagagcgacctgctagtggcc
gaatgcctgcgcacgcggatctggaaggggctcggaccggccgaactggccgcggtgctc
tcggcaatggtgttcgaaacccgtggcagcgacggcccgaccccgtcgcacgccatcgac
atgcccacgcagaaagtgcgccgcgcactggtcgagacgaggcggttgtccgggcagttg
cgcgctgacgagaaccgccaccggatcgctccgacccgcgagcccgatgagggattcgtc
cctgcggtataccgctgggcgacgaccggcgatctggcggctgccttggcggcttccgat
gtggccggcggcggcacgcccctgcctgcgggcgatttcgtgcggtggtgtcgccaggtg
ctcgatctgctcgaccaggtgcgcaatgccggcccggaagccggtctgcgagccactgcc
aaacgtgccatagacgacattcggcgcggcgtcgttgctgttgatggcgggtag
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