Mycolicibacterium sarraceniae: MSAR_43640
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Entry
MSAR_43640 CDS
T07083
Symbol
dnaE1
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msar
Mycolicibacterium sarraceniae
Pathway
msar03030
DNA replication
msar03430
Mismatch repair
msar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSAR_43640 (dnaE1)
03430 Mismatch repair
MSAR_43640 (dnaE1)
03440 Homologous recombination
MSAR_43640 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msar03032
]
MSAR_43640 (dnaE1)
03400 DNA repair and recombination proteins [BR:
msar03400
]
MSAR_43640 (dnaE1)
Enzymes [BR:
msar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSAR_43640 (dnaE1)
DNA replication proteins [BR:
msar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSAR_43640 (dnaE1)
DNA repair and recombination proteins [BR:
msar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSAR_43640 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBY61228
UniProt:
A0A7I7SWS3
LinkDB
All DBs
Position
complement(4265975..4269511)
Genome browser
AA seq
1178 aa
AA seq
DB search
MGKSFVHLHNHTEYSMLDGAAKITPMFAEAQRLGMSAIGMTDHGNMFGASEFYNAATKVG
IKPIIGVEAYIAPGSRFDTRRILWGDPGQKSDDVSGSGSYTHMTMVAENATGLRNLFKLS
TLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHEKEALESAAKWREI
FGPENYFLELMDHGLSIERRVREGLLEVGRKLGIPALATNDCHYVTRDASHNHEALLCIQ
TGKTLSDPNRFKFDGDGYYLKSAAEMRALWDAEVPEACDSTLLIGERVQSYADVWAPTDR
MPIFPVPDGHDQGSWLRHEVEAGLRRRFPDAVPPEYTERASFEIDVICGKGFPSYFLIVA
DLINYARSIDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDID
FDDRRRGEMVRYAAEKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIADRITKAL
PPPIMAKDISVSGITDPTHERYKEAAEVRALIDTDPDVRTIYETARGLEGLVRNAGVHAC
AVIMSSEPLIEAIPLWRRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDCIENIK
ANRGIDLDLDSLPFDDPKAYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLAL
YRPGPMGMNAHNDYADRKNNRQAIKPIHSELEEPLKEILNETYGLIVYQEQIMFIAQKVA
SYSMGKADALRKAMGKKKLEVLEAEYQGFKEGMTANGFSEKAVKALWDTILPFAGYAFNK
SHAAGYGLVSYWTAYLKANFPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLPPDVNE
SVQNFASVGNDIRFGLGAVRNVGANVVSSLVATRGDKGKFTDFSDYLNKIDISACNKKVT
ESLVKAGAFDSLNHPRKGLFLIHTDAVDSVLGTKKAEAIGQFDLFGGGDDSDTNDSAFTI
RVPDEEWDDKHKLALEREMLGLYVSGHPLNGVAHLLNAQVDTQIPNILAGDIANDTQVRV
GGILAGVNRRVNKNGMPWASAQLEDLTGGIEVMFFPQTYTMFGAEIADDAVVLVGGKVRI
QDDRISLIANDLVVPDFSNAQADRPVAVSLPTRQCTIDKVTALKQVLARHPGTSQVHLRL
ISGDRITTLELDQSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagagctttgtacacctgcacaaccacaccgagtattcgatgctcgacggtgcc
gcgaagatcaccccaatgttcgccgaggcgcagcgtctcgggatgtccgccatcggtatg
accgaccacggaaacatgttcggggccagcgagttctacaacgcggccaccaaggtcggc
atcaagccgatcatcggggtcgaggcgtatatcgctcccggctcccggttcgacacccgc
cgcatcctgtggggtgatccgggccagaagagcgacgatgtgtcgggcagcggctcctac
acccacatgacgatggtcgccgagaacgccaccggcctgcgcaacctgttcaagctgtcg
acgttggcctcattcgagggccagctcggcaagtggtcgcggatggacgccgagatcatc
gccgagcacgccgagggcatcatcgccaccaccggctgcccgtccggtgaggtccagacc
cggttgcggctgggccacgagaaggaggcgttggagtcggccgccaagtggcgggagatc
ttcggcccggagaactacttcctggaactgatggaccacgggctgtcgatcgagcgccgg
gtccgtgagggcctgcttgaggtcggccgcaagctcggcatcccggcgctggccaccaac
gactgccactacgtgactcgcgatgcgtcgcacaaccacgaggcgctgctctgcatccag
accggcaagacactgtcggaccccaaccggttcaagttcgacggtgacggctactacctg
aagtcggccgccgagatgcgcgcgctgtgggacgccgaggtgcccgaggcctgcgattcg
acgctgctgatcggcgagcgggtgcagtcctacgccgacgtctgggccccgaccgaccgg
atgccgatcttcccggtgcccgacggccacgaccagggcagctggctgcgtcacgaggtc
gaagccggtctgcggcggcgctttccggacgcggtgcccccggaatacaccgagcgcgcg
agcttcgagatcgacgtcatctgcggcaagggcttcccgtcgtacttcctgatcgtcgcc
gacctgatcaactacgcgcggtcgatcgacatccgggtggggcccggccgcggatcggcc
gccgggtcgctggtggcctatgcgctcggcatcaccaatatcgacccgattccgcacggg
ctcctgttcgagcggttcctgaacccggagcgcccgtcggcacccgatatcgatatcgac
ttcgacgaccgtcgccgcggtgagatggtgcgctacgccgccgagaaatggggcagcgac
cgggtggcccaggtcatcaccttcggcaccatcaagaccaaagcggcactgaaggattcg
gcgcgcgtccactacggccagccgggcttcgcgatcgccgaccggatcaccaaggcgctg
ccaccgccgatcatggccaaggacatctcggtgtcgggcatcaccgatcccacccacgag
cggtacaaagaggccgccgaggtccgcgccctgattgacaccgaccccgacgtgcgcacc
atctacgagaccgcgcgcgggctcgagggcctggtccgcaacgcgggcgtgcacgcctgc
gcggtgatcatgagctccgaaccgctgatcgaggcgatcccgctctggcggcggccgcag
gacggcgcgatcatcaccggctgggactatccgtcgtgcgaggccatcggcctgctgaag
atggacttcctcggcctgcggaacctgacgatcatcggtgactgcatcgagaacatcaag
gccaatcgcggtatcgacctggacctcgactccctgccgtttgacgacccgaaggcctac
gaactactggggcgcggtgacacgctgggcgtgttccagctcgacggcgggccaatgcgt
gacctgctgcggcgcatgcagcccaccgagttcaacgacatcgtcgccgtgttggcgctg
taccgcccgggcccgatgggcatgaacgcgcacaacgactacgccgaccgcaagaacaac
cggcaggccatcaagccgatccactcggagctggaggaaccgctcaaggagatcctcaac
gagacctacggcctgatcgtctaccaagagcagatcatgttcatcgcgcagaaggtcgcc
tcctactcgatgggtaaggccgatgctttgcgaaaagccatgggcaagaagaaacttgag
gtcctcgaggccgagtaccagggtttcaaagaggggatgaccgccaacggtttctccgaa
aaagcggtgaaggcgttgtgggacaccatcctgccgttcgccggctacgcattcaacaaa
tcgcatgccgccggctacgggctggtgtcctactggaccgcctatctcaaggccaatttc
ccggccgagtacatggccgggctgctcacctccgtcggggacgacaaggacaaggccgcg
gtctacctggcggactgccgccgcctcggcatcaccgtgctgccacccgatgtcaacgag
tcggtgcagaacttcgcctcggtgggtaacgacatccggttcgggctgggcgcggtccgc
aacgtcggcgccaatgtggtcagttcgctggtcgccacccgtggcgacaagggtaagttc
accgatttctcggactacctgaacaagatcgacatctcggcctgtaacaagaaagtcacc
gaatccttggtcaaggccggggctttcgactcgctgaatcatccccgcaagggcctgttc
ctgatccacaccgacgccgtcgactcggtgctgggcaccaagaaggccgaggcgatcggc
cagttcgacttgttcggcggcggtgacgacagcgataccaacgattcggcgttcaccatc
cgcgttcccgacgaggaatgggacgataagcacaagctcgcgctcgaacgggagatgttg
gggctgtacgtttccgggcacccactcaacggggtggcgcacctgcttaacgctcaggtg
gacacccagatcccgaacatcctcgccggcgatatcgccaacgacacccaggtgcgggtc
ggcggtatcctcgccggcgtcaaccggcgggtcaacaagaatggaatgccctgggcctca
gcgcagttggaagatctcaccggtggtattgaggtgatgttcttcccgcagacgtacacg
atgttcggggctgagatcgccgacgacgcggtggtgcttgtcggcggtaaggtccgcatc
caggacgaccggatctcgctgatcgccaatgatcttgtggtgcccgacttttccaatgcg
caggcggaccggccggtggcggtgagcctgcccacccggcagtgcaccatcgacaaggtc
accgcgctcaagcaggtgctggcccgtcatcccggcacctcgcaggtgcacctgcggctg
atcagtggtgatcgcatcaccacgctggaactcgatcaatcgctgcgggtgaccccgtcc
tcggcgctgatgggggatctgaaggcgctgctgggccctggctgcctaggcggctag
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