Mycolicibacterium smegmatis MC2 155: LJ00_25960
Help
Entry
LJ00_25960 CDS
T03433
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
msb
Mycolicibacterium smegmatis MC2 155
Pathway
msb00260
Glycine, serine and threonine metabolism
msb00460
Cyanoamino acid metabolism
msb00630
Glyoxylate and dicarboxylate metabolism
msb00670
One carbon pool by folate
msb00680
Methane metabolism
msb01100
Metabolic pathways
msb01110
Biosynthesis of secondary metabolites
msb01120
Microbial metabolism in diverse environments
msb01200
Carbon metabolism
msb01230
Biosynthesis of amino acids
msb01240
Biosynthesis of cofactors
msb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
msb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LJ00_25960
09102 Energy metabolism
00680 Methane metabolism
LJ00_25960
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LJ00_25960
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LJ00_25960
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LJ00_25960
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LJ00_25960
Enzymes [BR:
msb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LJ00_25960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AIU10282
UniProt:
A0R2V7
LinkDB
All DBs
Position
complement(5341332..5342804)
Genome browser
AA seq
490 aa
AA seq
DB search
MAADPSSNSSSVPAANGADYADTASAAYQAALQVIESVEPRVAAATRKELADQRDSLKLI
ASENYASPAVLLTMGTWFSDKYAEGTIGHRFYAGCQNVDTVESVAAEHARELFGAPYAYV
QPHSGIDANLVAFWAILATRVEAPELANFGAKHINDLSEADWETLRNKLGNQRLLGMSLD
AGGHLTHGFRPNISGKMFHQRSYGTNPETGFLDYDAVAAAAREFKPLVLVAGYSAYPRRV
NFAKMREIADEVGATLMVDMAHFAGLVAGKVFTGDEDPVPHAHVTTTTTHKSLRGPRGGM
VLATEEYAPAVDKGCPMVLGGPLSHVMAAKAVALAEARQPAFQQYAQQVADNAQALADGF
VKRDAGLVTGGTDNHIVLLDVTSFGLTGRQAESALLDAGIVTNRNSIPADPNGAWYTSGV
RLGTPALTSRGFGADDFDRVAELIVEVLANTQPEGTSKAKYKLADGTAERVHAASSELLS
ANPLYPGLTL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacccgtcgtccaactcctcttcggtgcccgccgctaacggggccgactat
gccgatacggccagcgccgcctaccaggccgcgctgcaggtcatcgaatccgtggagccc
cgggtcgccgcggccacacgcaaagaacttgccgaccaacgcgattcgctgaagctcatc
gccagtgagaactacgcgtcgcccgcggtgctgctgaccatgggcacgtggttctccgac
aagtacgccgagggcaccatcgggcaccgcttctacgccggctgccagaacgtcgacacc
gtcgagagcgtcgcggccgagcacgcacgcgaactgttcggcgccccctacgcgtacgtg
cagccgcactcgggcatcgacgccaacctggtcgcgttctgggcgatcctggccacgcgt
gtcgaggcccccgagctcgccaacttcggcgccaagcacatcaacgacctgtccgaggcc
gactgggagacgctgcgcaacaagctgggcaaccagcgtctgctcgggatgtcgctggac
gccggtgggcacctcacgcacggcttccggcccaacatctccggcaagatgttccaccag
cgcagctacggcaccaacccggagaccgggttcctcgactacgacgcggtcgccgcggcc
gcgcgcgagttcaagccgctggtgctggtggccggctactcggcctacccgcggcgcgtc
aacttcgccaagatgcgcgagatcgccgacgaggtcggcgcgacgctgatggtcgacatg
gcccacttcgcgggtctggtggcgggcaaggtgttcaccggtgacgaggatccggtgccg
cacgcgcacgtcaccaccacgaccacgcacaagtcgctgcgcggaccgcgcggcggcatg
gtgctcgcgaccgaggagtacgcacccgcggtcgacaagggctgcccgatggtgctcggc
ggaccgctgagccacgtcatggccgccaaggccgtggcgctggccgaggcgcgccagccc
gcgttccagcagtacgcgcagcaggtcgccgacaacgcgcaggccctggccgacggtttc
gtcaagcgcgacgccggcctggtgaccggcggcaccgacaaccacatcgtgctgctcgac
gtgacgtcgttcggcctcaccggccggcaggccgagtcggcgctgctcgacgcgggcatc
gtcaccaaccgcaactcgatccccgcggaccccaacggcgcctggtacaccagcggcgtc
cgcctcggtacgcccgcgctcaccagccgtggattcggtgccgacgatttcgaccgcgtc
gccgaactgatcgtcgaggtgctcgccaacacgcagcccgaggggacgtcgaaggccaag
tacaagctggccgacggcaccgccgagcgcgtgcacgcggcgtcgtcggagctgctctcg
gcaaacccgctgtacccgggtctgacgctctga
DBGET
integrated database retrieval system